RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 RPL7P18124 248 aaKnown RBP17.48■□□□□ 0.39
HLA-C-209ENST00000495835 HLA-DMBP28068 263 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 PSG9Q00887 426 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 OR4B1Q8NGF8 309 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 C17orf77Q96MU5 243 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 NUDT15Q9NV35 164 aa17.48■□□□□ 0.39
HLA-C-209ENST00000495835 TRAV10A0A0B4J240 114 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 TMEM189A5PLL7 270 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 DEDDO75618 318 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 LINC00869P0C866 280 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 RRAS2P62070 204 aaPredicted RBP17.47■□□□□ 0.39
HLA-C-209ENST00000495835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 ZNF709Q8N972 641 aa17.47■□□□□ 0.39
HLA-C-209ENST00000495835 TRAV6A0A075B6T7 132 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 A8MTW9 85 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 CCNKO75909 580 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 H2AFB2P0C5Z0 115 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 FAM78BQ5VT40 261 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 DOK5Q9P104 306 aa17.46■□□□□ 0.39
HLA-C-209ENST00000495835 KMT2AQ03164 3969 aa17.46■□□□□ 0.38
HLA-C-209ENST00000495835 L7N2F9 121 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 IGKV3-20P01619 116 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 DEFB1P60022 68 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 VAMP2P63027 116 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 MZT2BQ6NZ67 158 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 C12orf45Q8N5I9 185 aaPredicted RBP17.45■□□□□ 0.38
HLA-C-209ENST00000495835 SCRT1Q9BWW7 348 aa17.45■□□□□ 0.38
HLA-C-209ENST00000495835 FAM240BA0A1B0GVZ2 78 aa17.44■□□□□ 0.38
HLA-C-209ENST00000495835 DUSP14O95147 198 aaKnown RBP17.44■□□□□ 0.38
HLA-C-209ENST00000495835 OR5G3P0C626 314 aa17.44■□□□□ 0.38
HLA-C-209ENST00000495835 ZNF546Q86UE3 836 aa17.44■□□□□ 0.38
HLA-C-209ENST00000495835 C2orf50Q96LR7 162 aa17.44■□□□□ 0.38
HLA-C-209ENST00000495835 BIRC6Q9NR09 4857 aa17.44■□□□□ 0.38
HLA-C-209ENST00000495835 A0A087X0K7 114 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 CCSO14618 274 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 GOSR2O14653 212 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 AMBPP02760 352 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 Q6ZTC4 211 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 C20orf173Q96LM9 149 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 ARL6Q9H0F7 186 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 APLNQ9ULZ1 77 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 RFNGQ9Y644 331 aa17.43■□□□□ 0.38
HLA-C-209ENST00000495835 VPS13DQ5THJ4 4388 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 TEX48A0A1B0GUV7 120 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 C5orf51A6NDU8 294 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 FAM25EA8MYX2 175 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 IGLL5B9A064 214 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 F6UB75 175 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 PVALBP20472 110 aaPredicted RBP17.42■□□□□ 0.38
HLA-C-209ENST00000495835 ARL16Q0P5N6 197 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 SEC22CQ9BRL7 303 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 SLC35B3Q9H1N7 401 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 GOLT1BQ9Y3E0 138 aa17.42■□□□□ 0.38
HLA-C-209ENST00000495835 AGPAT2O15120 278 aa17.41■□□□□ 0.38
HLA-C-209ENST00000495835 ASAH1Q13510 395 aa17.41■□□□□ 0.38
HLA-C-209ENST00000495835 PATE2Q6UY27 113 aa17.41■□□□□ 0.38
HLA-C-209ENST00000495835 RNF126Q9BV68 326 aa17.41■□□□□ 0.38
HLA-C-209ENST00000495835 ARV1Q9H2C2 271 aa17.41■□□□□ 0.38
HLA-C-209ENST00000495835 TRAV8-2A0A0B4J237 113 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 SPART-AS1P0CW21 52 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 FXYD7P58549 80 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 SLC38A11Q08AI6 406 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 RAB31Q13636 194 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 C12orf74Q32Q52 190 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 AMTNQ6UX39 209 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 GSG1LQ6UXU4 331 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 UHRF2Q96PU4 802 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 C11orf1Q9H5F2 150 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 CELA1Q9UNI1 258 aa17.4■□□□□ 0.38
HLA-C-209ENST00000495835 LSM5Q9Y4Y9 91 aaKnown RBP17.4■□□□□ 0.38
HLA-C-209ENST00000495835 CXCL2P19875 107 aa17.39■□□□□ 0.37
HLA-C-209ENST00000495835 BCAP31P51572 246 aa17.39■□□□□ 0.37
HLA-C-209ENST00000495835 FGL1Q08830 312 aa17.39■□□□□ 0.37
HLA-C-209ENST00000495835 IL15RAQ13261 267 aa17.39■□□□□ 0.37
HLA-C-209ENST00000495835 CAV2P51636 162 aa17.38■□□□□ 0.37
HLA-C-209ENST00000495835 C1orf158Q8N1D5 194 aa17.38■□□□□ 0.37
HLA-C-209ENST00000495835 IGF2BP2-AS1Q96M15 143 aa17.38■□□□□ 0.37
HLA-C-209ENST00000495835 IGHV3OR16-12A0A075B7B8 117 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 DEFB131BA0A096LNP1 70 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 HBE1P02100 147 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 CNN1P51911 297 aaKnown RBP17.37■□□□□ 0.37
HLA-C-209ENST00000495835 B2MP61769 119 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 LINC00305Q7Z4B0 112 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 MGST2Q99735 147 aa17.37■□□□□ 0.37
HLA-C-209ENST00000495835 LYRM2Q9NU23 88 aaPredicted RBP17.37■□□□□ 0.37
HLA-C-209ENST00000495835 IGHV4-4A0A075B6R2 117 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 MRPS12O15235 138 aaKnown RBP17.36■□□□□ 0.37
HLA-C-209ENST00000495835 CXCL3P19876 107 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 S100A11P31949 105 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 PSG3Q16557 428 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 Q6ZRG5 221 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 BPIFA4PQ86YQ2 179 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 LRRC20Q8TCA0 184 aa17.36■□□□□ 0.37
HLA-C-209ENST00000495835 A6NHS1 94 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 CAMLGP49069 296 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 SULT1A1P50225 295 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 OXA1LQ15070 435 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 RRN3P1Q2M238 152 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 VWC2Q2TAL6 325 aa17.35■□□□□ 0.37
HLA-C-209ENST00000495835 LCN15Q6UWW0 184 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms