RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 POLR2GP62487 172 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 ID3Q02535 119 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 FGL1Q08830 312 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 IGF2BP2-AS1Q96M15 143 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
CLCNKA-207ENST00000495784 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 DUSP14O95147 198 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 CNN1P51911 297 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 RAP2BP61225 183 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 OXA1LQ15070 435 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 PSENENQ9NZ42 101 aa13.11□□□□□ -0.31
CLCNKA-207ENST00000495784 A8MTW9 85 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 SSSCA1O60232 199 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 TRIQKQ629K1 86 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 IGFL4Q6B9Z1 124 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 KRTAP17-1Q9BYP8 105 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 SRRQ9GZT4 340 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
CLCNKA-207ENST00000495784 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 H3BRN7 92 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 HYPMO75409 117 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 NDUFB6O95139 128 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 INSP01308 110 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 RPL7P18124 248 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 DAD1P61803 113 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 ZNF738Q8NE65 137 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 OR11H7Q8NGC8 314 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 KIAA1109Q2LD37 5005 aa13.09□□□□□ -0.31
CLCNKA-207ENST00000495784 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 M0R2Z0 102 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 OR5G3P0C626 314 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 LINC00869P0C866 280 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 SELENOTP62341 195 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 S100A7AQ86SG5 101 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 FLVCR2Q9UPI3 526 aa13.08□□□□□ -0.32
CLCNKA-207ENST00000495784 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 FAT2Q9NYQ8 4349 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 LINC00854A0A1B0GVQ3 168 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 OR4E1P0C645 316 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 RRAS2P62070 204 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 LGALS9BQ3B8N2 356 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 SMIM8Q96KF7 97 aa13.07□□□□□ -0.32
CLCNKA-207ENST00000495784 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 ZNF705GA8MUZ8 300 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 METTL15P1P0C7V9 234 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 B2MP61769 119 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 DLK1P80370 383 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 BAK1Q16611 211 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 TMEM88Q6PEY1 159 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 LRRC20Q8TCA0 184 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 UHRF2Q96PU4 802 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 RBM38Q9H0Z9 239 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
CLCNKA-207ENST00000495784 A0A1B0GVY2 172 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 CENPXA8MT69 81 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 RTL8CO15255 209 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 CCNKO75909 580 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 ANXA7P20073 488 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 PLP1P60201 277 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 RNF212Q495C1 297 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 ARL6Q9H0F7 186 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 NPVFQ9HCQ7 196 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
CLCNKA-207ENST00000495784 BOLA2-SMG1P6H3BVE0 249 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 ZNF701M0R085 212 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 PRM2P04554 102 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 RHOBP62745 196 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 IAH1Q2TAA2 248 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 TMEM14EPQ6UXP3 125 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 DNAH17Q9UFH2 4485 aa13.04□□□□□ -0.32
CLCNKA-207ENST00000495784 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 A0A087X0K7 114 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 FNDC10F2Z333 226 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 CXCL3P19876 107 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 SLC38A11Q08AI6 406 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 TEPPQ6URK8 271 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 GSKIPQ9P0R6 139 aa13.03□□□□□ -0.32
CLCNKA-207ENST00000495784 K7EPK0 472 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 TSC22D2O75157 780 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
CLCNKA-207ENST00000495784 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms