RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 GYPAP02724 150 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 AMY2AP04746 511 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 GCSHP23434 173 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 RBMXP38159 391 aaKnown RBP9.37□□□□□ -0.91
BRCA1-222ENST00000493919 TESK1Q15569 626 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 CR1LQ2VPA4 569 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 TP53TG1Q9Y2A0 90 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 R4GMQ9 66 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 IQCF6A8MYZ5 107 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 FSTP19883 344 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 Q6ZR03 302 aa9.36□□□□□ -0.91
BRCA1-222ENST00000493919 HIVEP1P15822 2718 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 IGHV3-64DA0A0J9YX35 117 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 H3BSH0 61 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 J3QLW9 94 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 J3QRE1 110 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 NDUFA7O95182 113 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A24PP0C7X0 464 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 CCL20P78556 96 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 HES1Q14469 280 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 DMKNQ6E0U4 476 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 STHQ8IWL8 128 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 TPRX1Q8N7U7 411 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM168AQ92567 244 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 IGHV4-30-2A0A087WSY4 118 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 SH2D7A6NKC9 451 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 APOMO95445 188 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 BCL2P10415 239 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 CA6P23280 308 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 NKX2-1P43699 371 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 TMEM50BP56557 158 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 Q499Y3 187 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 BPIFA4PQ86YQ2 179 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 FAM103A1Q9BTL3 118 aaKnown RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 EDA2RQ9HAV5 297 aa9.35□□□□□ -0.91
BRCA1-222ENST00000493919 SIRT4Q9Y6E7 314 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-222ENST00000493919 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A22PA8MWA6 464 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A12PA8MX19 464 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 PITX3O75364 302 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 SRSF10O75494 262 aaKnown RBP9.34□□□□□ -0.91
BRCA1-222ENST00000493919 WFDC2Q14508 124 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 SPRNQ5BIV9 151 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 ITLN1Q8WWA0 313 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
BRCA1-222ENST00000493919 LYZL4Q96KX0 146 aa9.34□□□□□ -0.91
BRCA1-222ENST00000493919 CGB1A6NKQ9 187 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 LRRC30A6NM36 301 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 H3BMG7 143 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 DEDDO75618 318 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 ASIPP42127 132 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 MAPK1IP1LQ8NDC0 245 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 OR8B3Q8NGG8 313 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 RDH5Q92781 318 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 PGLYRP3Q96LB9 341 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 OR8B2Q96RD0 313 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 CLEC7AQ9BXN2 247 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 BPESC1Q9GZL8 116 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 NSG2Q9Y328 171 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 V9GY05 133 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 F8P00451 2351 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 ACANP16112 2415 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 COL8A2P25067 703 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 DSCR9P59020 149 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
BRCA1-222ENST00000493919 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 C10orf105Q8TEF2 133 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 CCL17Q92583 94 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
BRCA1-222ENST00000493919 SLC25A39Q9BZJ4 359 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-222ENST00000493919 A0A1W2PS18 150 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 SNCGO76070 127 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 UBE2G1P62253 170 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 CX3CL1P78423 397 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 GAGE13Q4V321 117 aa9.32□□□□□ -0.92
BRCA1-222ENST00000493919 TMEM200BQ69YZ2 307 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms