RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
UPF3A-210ENST00000493727 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 FFAR4Q5NUL3 377 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 LCE1DQ5T752 114 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
UPF3A-210ENST00000493727 Q6ZRG5 221 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 STOML3Q8TAV4 291 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 C20orf24Q9BUV8 137 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 SH3BGRL3Q9H299 93 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 SLC25A32Q9H2D1 315 aa9.24□□□□□ -0.93
UPF3A-210ENST00000493727 ZNF320A2RRD8 509 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 NDUFA4O00483 81 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 COX7A2P2O60397 106 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 ORM2P19652 201 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 OR1B1Q8NGR6 318 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
UPF3A-210ENST00000493727 SLC39A9Q9NUM3 307 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 DOK5Q9P104 306 aa9.23□□□□□ -0.93
UPF3A-210ENST00000493727 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
UPF3A-210ENST00000493727 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 OR5G3P0C626 314 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 ACOT6Q3I5F7 207 aaPredicted RBP9.22□□□□□ -0.93
UPF3A-210ENST00000493727 AKR1C8PQ5T2L2 129 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 TOMM20LQ6UXN7 152 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 TMEM182Q6ZP80 229 aaPredicted RBP9.22□□□□□ -0.93
UPF3A-210ENST00000493727 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 TMED6Q8WW62 240 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 RNF125Q96EQ8 232 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 PRR25Q96S07 402 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 ARV1Q9H2C2 271 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
UPF3A-210ENST00000493727 HYPMO75409 117 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 MBP02144 154 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 SPP1P10451 314 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 S100A7P31151 101 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 SYNJ2BPP57105 145 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 SERF2P84101 59 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 PXDC1Q5TGL8 231 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 S100A7AQ86SG5 101 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 GPHB5Q86YW7 130 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 TMEM190Q8WZ59 177 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
UPF3A-210ENST00000493727 METTL26Q96S19 204 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 PFDN5Q99471 154 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 UFC1Q9Y3C8 167 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
UPF3A-210ENST00000493727 OVOL1O14753 267 aa9.2□□□□□ -0.94
UPF3A-210ENST00000493727 ZNF207O43670 478 aaKnown RBP9.2□□□□□ -0.94
UPF3A-210ENST00000493727 C10orf113Q5VZT2 155 aa9.2□□□□□ -0.94
UPF3A-210ENST00000493727 UNQ9165/PRO28630Q6UXU0 137 aa9.2□□□□□ -0.94
UPF3A-210ENST00000493727 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
UPF3A-210ENST00000493727 M6PRP20645 277 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 RAB2AP61019 212 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
UPF3A-210ENST00000493727 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 CASC10Q5T4H9 136 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 FAM122CQ6P4D5 195 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 ALKAL2Q6UX46 152 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 OR10G4Q8NGN3 311 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 OR10G9Q8NGN4 311 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 OR10G7Q8NGN6 311 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 DNAJC4Q9NNZ3 241 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 PEMTQ9UBM1 199 aa9.19□□□□□ -0.94
UPF3A-210ENST00000493727 A0A1W2PPV4 95 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 UMAD1C9J7I0 102 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 LGALS9O00182 355 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 NPPCP23582 126 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 BMI1P35226 326 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 PLP1P60201 277 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 KLF5Q13887 457 aaPredicted RBP9.18□□□□□ -0.94
UPF3A-210ENST00000493727 PLECQ15149 4684 aaKnown RBP9.18□□□□□ -0.94
UPF3A-210ENST00000493727 FAM213BQ8TBF2 198 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 DLX4Q92988 240 aaPredicted RBP9.18□□□□□ -0.94
UPF3A-210ENST00000493727 RNF2Q99496 336 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
UPF3A-210ENST00000493727 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
UPF3A-210ENST00000493727 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 SAP30O75446 220 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 IFNA7P01567 189 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 CDC34P49427 236 aaPredicted RBP9.17□□□□□ -0.94
UPF3A-210ENST00000493727 RHOBP62745 196 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 FAM74A1Q5RGS3 127 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 FAM78BQ5VT40 261 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 LINC00305Q7Z4B0 112 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 OR9G4Q8NGQ1 327 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 MUC7Q8TAX7 377 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 ZNF414Q96IQ9 312 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 ELOVL1Q9BW60 279 aa9.17□□□□□ -0.94
UPF3A-210ENST00000493727 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
UPF3A-210ENST00000493727 ACTR3CQ9C0K3 210 aaPredicted RBP9.17□□□□□ -0.94
UPF3A-210ENST00000493727 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms