RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PYYP10082 97 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 ZP3P21754 424 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 S100A7P31151 101 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
VPS52-220ENST00000493674 TAGLN2P37802 199 aaKnown RBP9.66□□□□□ -0.86
VPS52-220ENST00000493674 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
VPS52-220ENST00000493674 ICAM4Q14773 271 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 TOR2AQ5JU69 321 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 METTL26Q96S19 204 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 PAXXQ9BUH6 204 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 OR51M1Q9H341 326 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 SMDT1Q9H4I9 107 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 GNG13Q9P2W3 67 aa9.66□□□□□ -0.86
VPS52-220ENST00000493674 LINC01619G3V211 115 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 IFNA1P01562 189 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.86
VPS52-220ENST00000493674 FOXL1Q12952 345 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 KLF5Q13887 457 aaPredicted RBP9.65□□□□□ -0.86
VPS52-220ENST00000493674 RPEL1Q2QD12 228 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 C1QL4Q86Z23 238 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 C17orf77Q96MU5 243 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 RARRES2Q99969 163 aa9.65□□□□□ -0.86
VPS52-220ENST00000493674 DAZ1Q9NQZ3 744 aaKnown RBP9.65□□□□□ -0.86
VPS52-220ENST00000493674 A0A1W2PRE2 83 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 C9JQL5 133 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 HAX1O00165 279 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
VPS52-220ENST00000493674 HIST1H1EP10412 219 aaKnown RBP9.64□□□□□ -0.87
VPS52-220ENST00000493674 NPPCP23582 126 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 HAGHQ16775 308 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 HIST2H2BDQ6DRA6 164 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 BPIFA4PQ86YQ2 179 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 OR1N2Q8NGR9 330 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 GLMPQ8WWB7 406 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 GPR82Q96P67 336 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 TXNDC17Q9BRA2 123 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 UFC1Q9Y3C8 167 aa9.64□□□□□ -0.87
VPS52-220ENST00000493674 YTHDF2Q9Y5A9 579 aaKnown RBP9.64□□□□□ -0.87
VPS52-220ENST00000493674 A0A087X0K7 114 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 H3BQ15 152 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
VPS52-220ENST00000493674 PAGE4O60829 102 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 OR10J4P0C629 311 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 RPL7P18124 248 aaKnown RBP9.63□□□□□ -0.87
VPS52-220ENST00000493674 MYCNOSP40205 109 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 CD81P60033 236 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 MEF2BQ02080 365 aaPredicted RBP9.63□□□□□ -0.87
VPS52-220ENST00000493674 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 KHDC1LQ5JSQ8 128 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 CCDC28AQ8IWP9 274 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 C11orf44Q8N8P7 122 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
VPS52-220ENST00000493674 SRP19P09132 144 aaKnown RBP9.62□□□□□ -0.87
VPS52-220ENST00000493674 NBEAP1P0C6P0 100 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 SLURP1P55000 103 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 PEA15Q15121 130 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 AWAT1Q58HT5 328 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 IQCF2Q8IXL9 164 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 CITED4Q96RK1 184 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 EIF5A2Q9GZV4 153 aaKnown RBP9.62□□□□□ -0.87
VPS52-220ENST00000493674 TMEM231Q9H6L2 316 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 SMPXQ9UHP9 88 aa9.62□□□□□ -0.87
VPS52-220ENST00000493674 TRBV19A0A075B6N1 114 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 A0A1W2PS18 150 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 CHEK1O14757 476 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 ZNF253O75346 499 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 NDUFB4O95168 129 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 EDN2P20800 178 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 ATP5G3P48201 142 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 UBE2G2P60604 165 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 PDE6HQ13956 83 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 OR8I2Q8N0Y5 310 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 CITED1Q99966 193 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 VWFP04275 2813 aa9.61□□□□□ -0.87
VPS52-220ENST00000493674 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 C2orf70A6NJV1 201 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 C11orf94C9JXX5 98 aa9.6□□□□□ -0.87
VPS52-220ENST00000493674 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms