RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
PTPRU-208ENST00000493601 TMEM144Q7Z5S9 345 aa11.82□□□□□ -0.52
PTPRU-208ENST00000493601 A0A1B0GVY2 172 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 H3BRN7 92 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 INSP01308 110 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 CNN1P51911 297 aaKnown RBP11.81□□□□□ -0.52
PTPRU-208ENST00000493601 RAP2BP61225 183 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 DAD1P61803 113 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 SPANXN2Q5MJ10 180 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 TMEM182Q6ZP80 229 aaPredicted RBP11.81□□□□□ -0.52
PTPRU-208ENST00000493601 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 CCDC190Q86UF4 302 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 C17orf77Q96MU5 243 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 HIGD1AQ9Y241 93 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 FAT2Q9NYQ8 4349 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 PKHD1P08F94 4074 aa11.81□□□□□ -0.52
PTPRU-208ENST00000493601 C9orf170A2RU37 121 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 IL5P05113 134 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
PTPRU-208ENST00000493601 INPP1P49441 399 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 ID3Q02535 119 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 S100A7AQ86SG5 101 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 OR11H7Q8NGC8 314 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 SHANK2-AS3Q9BTD1 123 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
PTPRU-208ENST00000493601 KIAA1109Q2LD37 5005 aa11.8□□□□□ -0.52
PTPRU-208ENST00000493601 DNAH2Q9P225 4427 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 M0R2Z0 102 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 RTL8CO15255 209 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 SSSCA1O60232 199 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 HYPMO75409 117 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 ADAP1O75689 374 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 NDUFB6O95139 128 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 B2MP61769 119 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 SELENOTP62341 195 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPRU-208ENST00000493601 FGL1Q08830 312 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 SPINK13Q1W4C9 94 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 RNF212Q495C1 297 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 RNF182Q8N6D2 247 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
PTPRU-208ENST00000493601 NAP1L6A6NFF2 107 aa11.78□□□□□ -0.52
PTPRU-208ENST00000493601 LINC00869P0C866 280 aa11.78□□□□□ -0.52
PTPRU-208ENST00000493601 TRIQKQ629K1 86 aa11.78□□□□□ -0.52
PTPRU-208ENST00000493601 IGFL4Q6B9Z1 124 aa11.78□□□□□ -0.52
PTPRU-208ENST00000493601 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
PTPRU-208ENST00000493601 IGLV2-18A0A075B6J9 118 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 LYRM9A8MSI8 78 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 OR5G3P0C626 314 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 TSPOP30536 169 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 PLP1P60201 277 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 DLK1P80370 383 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 SOHLH1Q5JUK2 328 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 Q6ZR54 194 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 SMIM8Q96KF7 97 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 RNF24Q9Y225 148 aa11.77□□□□□ -0.53
PTPRU-208ENST00000493601 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 A0A087X0K7 114 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
PTPRU-208ENST00000493601 FNDC10F2Z333 226 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
PTPRU-208ENST00000493601 OR4E1P0C645 316 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
PTPRU-208ENST00000493601 UHRF2Q96PU4 802 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 MGAT4CQ9UBM8 478 aa11.76□□□□□ -0.53
PTPRU-208ENST00000493601 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 K7EPK0 472 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 FAM3BP58499 235 aaPredicted RBP11.75□□□□□ -0.53
PTPRU-208ENST00000493601 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
PTPRU-208ENST00000493601 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 TMEM256Q8N2U0 113 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 RBM38Q9H0Z9 239 aaKnown RBP11.75□□□□□ -0.53
PTPRU-208ENST00000493601 NPVFQ9HCQ7 196 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 FLVCR2Q9UPI3 526 aa11.75□□□□□ -0.53
PTPRU-208ENST00000493601 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 ZNF701M0R085 212 aaPredicted RBP11.74□□□□□ -0.53
PTPRU-208ENST00000493601 CCNKO75909 580 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 METTL15P1P0C7V9 234 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 CXCL3P19876 107 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 RHOBP62745 196 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 TEPPQ6URK8 271 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 OR8A1Q8NGG7 326 aa11.74□□□□□ -0.53
PTPRU-208ENST00000493601 ARL6Q9H0F7 186 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms