RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 PRR20EP86478 221 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PRR20CP86479 221 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PRR20DP86480 221 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PRR20BP86481 221 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PRR20AP86496 221 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 FGL1Q08830 312 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 C10orf113Q5VZT2 155 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 LINC00305Q7Z4B0 112 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 STHQ8IWL8 128 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 ATP5SQ99766 215 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 SEPSECSQ9HD40 501 aaKnown RBP9.45□□□□□ -0.9
CLIP2-209ENST00000493166 RETNQ9HD89 108 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 PXMP4Q9Y6I8 212 aa9.45□□□□□ -0.9
CLIP2-209ENST00000493166 KIR2DL5BA0A0G2JN68 375 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 KIR2DL5BA0A0G2JPC4 375 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 RPL7P18124 248 aaKnown RBP9.44□□□□□ -0.9
CLIP2-209ENST00000493166 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
CLIP2-209ENST00000493166 ID1P41134 155 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 PSMB3P49720 205 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 KIR2DL5AQ8N109 375 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 OR1L4Q8NGR5 311 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 PFDN5Q99471 154 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 DNAJC4Q9NNZ3 241 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 SLC39A9Q9NUM3 307 aa9.44□□□□□ -0.9
CLIP2-209ENST00000493166 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 UBE2CO00762 179 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 SOCS3O14543 225 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 ACTL10Q5JWF8 245 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 ZNF709Q8N972 641 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 C16orf92Q96LL3 132 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 LINC00052Q96N35 136 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 WDR61Q9GZS3 305 aaKnown RBP9.43□□□□□ -0.9
CLIP2-209ENST00000493166 KCNIP2Q9NS61 270 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
CLIP2-209ENST00000493166 ISLRO14498 428 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 IFNA5P01569 189 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 SCGB1C1Q8TD33 95 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 CSTL1Q9H114 145 aa9.42□□□□□ -0.9
CLIP2-209ENST00000493166 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 Q5BKY6 102 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 MORN5Q5VZ52 161 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 Q6ZWC4 215 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
CLIP2-209ENST00000493166 BPIFA4PQ86YQ2 179 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 OR2T35Q8NGX2 323 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 GATAD1Q8WUU5 269 aa9.41□□□□□ -0.9
CLIP2-209ENST00000493166 DNAH7Q8WXX0 4024 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 FXYD6-FXYD2A0A087WZ82 144 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 A0A087X0K7 114 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 CA1P00915 261 aaPredicted RBP9.4□□□□□ -0.9
CLIP2-209ENST00000493166 INO80EQ8NBZ0 244 aaPredicted RBP9.4□□□□□ -0.9
CLIP2-209ENST00000493166 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 AQP10Q96PS8 301 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
CLIP2-209ENST00000493166 SPRY2O43597 315 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 SPP1P10451 314 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 HLA-DRB4P13762 266 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
CLIP2-209ENST00000493166 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
CLIP2-209ENST00000493166 WFDC1Q9HC57 220 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 HLA-DRB4X5D2U9 266 aa9.39□□□□□ -0.91
CLIP2-209ENST00000493166 TRAV5A0A0B4J249 113 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 H3BMM0 161 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
CLIP2-209ENST00000493166 CXCL2P19875 107 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 DEFB1P60022 68 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 ZNF266Q14584 549 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 EBLN2Q6P2I7 272 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 LCN15Q6UWW0 184 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 RNF183Q96D59 192 aa9.38□□□□□ -0.91
CLIP2-209ENST00000493166 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
CLIP2-209ENST00000493166 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
CLIP2-209ENST00000493166 TMEM41BQ5BJD5 291 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 RNF182Q8N6D2 247 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 ZNF738Q8NE65 137 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
CLIP2-209ENST00000493166 TNFSF18Q9UNG2 199 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms