RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TMEM189A5PLL7 270 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 A8MTW9 85 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 ZNF705FA8MVS1 300 aaPredicted RBP8.28□□□□□ -1.08
LRTM1-202ENST00000493075 H3BRN7 92 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 HYPMO75409 117 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 DEDDO75618 318 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 MBPP02686 304 aaPredicted RBP8.28□□□□□ -1.08
LRTM1-202ENST00000493075 METTL15P1P0C7V9 234 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
LRTM1-202ENST00000493075 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
LRTM1-202ENST00000493075 DEFB1P60022 68 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 RAP2BP61225 183 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 FAM78BQ5VT40 261 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 TEPPQ6URK8 271 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 ZNF709Q8N972 641 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
LRTM1-202ENST00000493075 SLC25A22Q9H936 323 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 MGAT4CQ9UBM8 478 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
LRTM1-202ENST00000493075 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
LRTM1-202ENST00000493075 C7orf66A4D0T2 115 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 IGLL5B9A064 214 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 SCGB1D2O95969 90 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 RPL7P18124 248 aaKnown RBP8.27□□□□□ -1.09
LRTM1-202ENST00000493075 ZNF846Q147U1 533 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 PXDC1Q5TGL8 231 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 Q6ZTC4 211 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 ZNF431Q8TF32 576 aaPredicted RBP8.27□□□□□ -1.09
LRTM1-202ENST00000493075 C20orf173Q96LM9 149 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 DOK5Q9P104 306 aa8.27□□□□□ -1.09
LRTM1-202ENST00000493075 RCL1Q9Y2P8 373 aaKnown RBP8.27□□□□□ -1.09
LRTM1-202ENST00000493075 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 CCNKO75909 580 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 DUSP14O95147 198 aaKnown RBP8.26□□□□□ -1.09
LRTM1-202ENST00000493075 LINC00869P0C866 280 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 RRAS2P62070 204 aaPredicted RBP8.26□□□□□ -1.09
LRTM1-202ENST00000493075 RNF126Q9BV68 326 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 SCRT1Q9BWW7 348 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 GOLT1BQ9Y3E0 138 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 RFNGQ9Y644 331 aa8.26□□□□□ -1.09
LRTM1-202ENST00000493075 TRAV6A0A075B6T7 132 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 TRAV8-2A0A0B4J237 113 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 F6UB75 175 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 L7N2F9 121 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 AMBPP02760 352 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 H2AFB2P0C5Z0 115 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 OR5G3P0C626 314 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 SPART-AS1P0CW21 52 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 FXYD7P58549 80 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 VAMP2P63027 116 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 ARL16Q0P5N6 197 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 AMTNQ6UX39 209 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 PATE2Q6UY27 113 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 C12orf45Q8N5I9 185 aaPredicted RBP8.25□□□□□ -1.09
LRTM1-202ENST00000493075 RPP25LQ8N5L8 163 aaKnown RBP8.25□□□□□ -1.09
LRTM1-202ENST00000493075 S100ZQ8WXG8 99 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 C2orf50Q96LR7 162 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 ARL6Q9H0F7 186 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 SLC35B3Q9H1N7 401 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 NUDT15Q9NV35 164 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
LRTM1-202ENST00000493075 A0A087X0K7 114 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 DEFB131BA0A096LNP1 70 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 GOSR2O14653 212 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 AGPAT2O15120 278 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 GSG1LQ6UXU4 331 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 ZNF546Q86UE3 836 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 C1orf158Q8N1D5 194 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 ARPC5LQ9BPX5 153 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 ARV1Q9H2C2 271 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 C11orf1Q9H5F2 150 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 AGRNO00468 2067 aa8.24□□□□□ -1.09
LRTM1-202ENST00000493075 IGHV4-4A0A075B6R2 117 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 FAM240BA0A1B0GVZ2 78 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 C5orf51A6NDU8 294 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 CCSO14618 274 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 HBE1P02100 147 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
LRTM1-202ENST00000493075 B2MP61769 119 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 FGL1Q08830 312 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 SLC38A11Q08AI6 406 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 IL15RAQ13261 267 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 RAB31Q13636 194 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 MZT2BQ6NZ67 158 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 UHRF2Q96PU4 802 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 SEC22CQ9BRL7 303 aa8.23□□□□□ -1.09
LRTM1-202ENST00000493075 LOC100996750A0A140TA64 210 aa8.22□□□□□ -1.09
LRTM1-202ENST00000493075 MRPS12O15235 138 aaKnown RBP8.22□□□□□ -1.09
LRTM1-202ENST00000493075 CXCL2P19875 107 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms