RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TDRG1Q3Y452 100 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 FAM169BQ8N8A8 192 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 YPEL4Q96NS1 127 aa17.1■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SMAD7O15105 426 aaKnown RBP17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHG3P01860 377 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PF4V1P10720 104 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 FXYD7P58549 80 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 FAM71F2Q6NXP2 309 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGHV1-24A0A0C4DH33 117 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 PPIFP30405 207 aaKnown RBP17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 TTC32Q5I0X7 151 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ARMS2P0C7Q2 107 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IFI27P40305 119 aaPredicted RBP17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 SNCGO76070 127 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 ZNF134P52741 427 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 DPF1Q92782 380 aa17.09■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 TIMM23O14925 209 aa17.08■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 LSM4Q9Y4Z0 139 aaKnown RBP17.08■□□□□ 0.33
CHKB-CPT1B-203ENST00000492556 IGKV2-40A0A087WW87 121 aaPredicted RBP17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 IGKV2D-40P01614 121 aaPredicted RBP17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 GTSCR1Q86UQ5 136 aa17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 EBLN2Q6P2I7 272 aa17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 VCX2Q9H322 139 aa17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 C17orf58Q2M2W7 97 aa17.08■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 A0A1W2PPI3 338 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 TMEM178BH3BS89 294 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 SH2D1AO60880 128 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 FAM159AQ6UWV7 190 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 IGHV1-3A0A0C4DH29 117 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 HOXA3O43365 443 aaPredicted RBP17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 SMAGPQ0VAQ4 97 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 MAJINQ3KP22 176 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 GAGE13Q4V321 117 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 LINC01560Q8TB33 94 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 WIPF2Q8TF74 440 aaPredicted RBP17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 ZNRD1Q9P1U0 126 aa17.07■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 AMN1Q8IY45 258 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 RNASE6Q93091 150 aaKnown RBP17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 SIGLEC9Q9Y336 463 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 UCNP55089 124 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 CRIP3Q6Q6R5 217 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 KIR3DL3Q8N743 410 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 CD59P13987 128 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 ORMDL2Q53FV1 153 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 FAM74A4Q5TZK3 123 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 ODF3L1Q8IXM7 274 aa17.06■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 CD24P25063 80 aa17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 RNF5Q99942 180 aa17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 PAPPA-AS1Q5QFB9 102 aa17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 CLEC19AQ6UXS0 136 aa17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 VKORC1Q9BQB6 163 aa17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 RIF1Q5UIP0 2472 aaKnown RBP17.05■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 H3BRM9 83 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 PAX2Q02962 417 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 KLF5Q13887 457 aaPredicted RBP17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 ZNF56Q15929 161 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 NPIPB6E9PJ23 425 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 LAGE3Q14657 143 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 POU2AF1Q16633 256 aa17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 CHTOPQ9Y3Y2 248 aaKnown RBP17.04■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 IGLC7A0M8Q6 106 aa17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 COX8AP10176 69 aa17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 KLF17Q5JT82 389 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 HAX1O00165 279 aa17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 BEX4Q9NWD9 120 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 MBD3L4A6NDZ8 208 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 MBD3L3A6NE82 208 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 MBD3L5A6NJ08 208 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 BVES-AS1Q5T3Y7 98 aa17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 MBD3L2Q8NHZ7 208 aaPredicted RBP17.03■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 ZNF833PQ6ZTB9 187 aa17.02■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 FAM168AQ92567 244 aa17.02■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 IGLV2-14P01704 120 aa17.02■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 SHANK2-AS3Q9BTD1 123 aa17.02■□□□□ 0.32
CHKB-CPT1B-203ENST00000492556 TMEM75Q8N9X5 138 aa17.02■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 NCOA6Q14686 2063 aaPredicted RBP17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TRGV3P03979 118 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CFHR2P36980 270 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ASPHD1Q5U4P2 390 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 NUP37Q8NFH4 326 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 FXYD5Q96DB9 178 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 C9orf118A6NHY6 69 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 FAM106AQ4KMX7 169 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CCL25O15444 150 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 SFTA2Q6UW10 78 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ROS1P08922 2347 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 SMKR1H3BMG3 65 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 GATA4P43694 442 aa17.01■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 LYNX1G3V0Z9 82 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 LYNX1P0DP58 116 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 C11orf53Q8IXP5 236 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ZNF815PA8K554 130 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ZC2HC1BQ5TFG8 222 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 Q6ZPA2 131 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 WT1-ASQ06250 92 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 Q6ZVH6 145 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CHAC1Q9BUX1 264 aa17■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 Q8TAT8 98 aa16.99■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 SPTBN1Q01082 2364 aaKnown RBP16.99■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ZNF474Q6S9Z5 364 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms