RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 DUSP14O95147 198 aaKnown RBP12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 AMBPP02760 352 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 OR5G3P0C626 314 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 METTL15P1P0C7V9 234 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 PSG9Q00887 426 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 CYP2G1PQ6ZSU1 146 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 NEU1Q99519 415 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 PPP1R14DQ9NXH3 145 aa12.02□□□□□ -0.49
PDLIM2-217ENST00000491330 IGHV3OR16-12A0A075B7B8 117 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 GOSR2O14653 212 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 HBG1P69891 147 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 HBG2P69892 147 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 FGL1Q08830 312 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 ZNF546Q86UE3 836 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 X6R8D5 127 aa12.01□□□□□ -0.49
PDLIM2-217ENST00000491330 DNAH7Q8WXX0 4024 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 CCSO14618 274 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 HBE1P02100 147 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 RLN2P04090 185 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 RBMY1A1P0DJD3 496 aaKnown RBP12□□□□□ -0.49
PDLIM2-217ENST00000491330 RBMY1CP0DJD4 496 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 IL15RAQ13261 267 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 RBMY1FQ15415 496 aaKnown RBP12□□□□□ -0.49
PDLIM2-217ENST00000491330 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 STX12Q86Y82 276 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 NMES1Q9C002 83 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 LYRM2Q9NU23 88 aaPredicted RBP12□□□□□ -0.49
PDLIM2-217ENST00000491330 DOK5Q9P104 306 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 RFNGQ9Y644 331 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 RYR3Q15413 4870 aa12□□□□□ -0.49
PDLIM2-217ENST00000491330 LINC00869P0C866 280 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 S100A11P31949 105 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 BCAP31P51572 246 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 CAV2P51636 162 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 RRAS2P62070 204 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 SLC25A39Q9BZJ4 359 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 SLC25A32Q9H2D1 315 aa11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
PDLIM2-217ENST00000491330 DEFB131BA0A096LNP1 70 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 A0A0J9YX75 114 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 GATA2P23769 480 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 SULT1A1P50225 295 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 B2MP61769 119 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 IFITM3Q01628 133 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 RNF126Q9BV68 326 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 C11orf1Q9H5F2 150 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 AGRNO00468 2067 aa11.98□□□□□ -0.49
PDLIM2-217ENST00000491330 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 PET100P0DJ07 73 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 EMP1P54849 157 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 FXYD7P58549 80 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 SLC38A11Q08AI6 406 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 RRN3P1Q2M238 152 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 Q6ZRG5 221 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 Q6ZTC4 211 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 CHAC2Q8WUX2 184 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 SHANK2-AS3Q9BTD1 123 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 NDUFAF3Q9BU61 184 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 ARL6Q9H0F7 186 aa11.97□□□□□ -0.49
PDLIM2-217ENST00000491330 H3BRN7 92 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 SOCS3O14543 225 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 MPDU1O75352 247 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 S100A10P60903 97 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 RAB32Q13637 225 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 VWC2Q2TAL6 325 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 SLC25A31Q9H0C2 315 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 UQCC1Q9NVA1 299 aa11.96□□□□□ -0.49
PDLIM2-217ENST00000491330 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 ZNF705FA8MVS1 300 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 E5RGE8 158 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 COX7A2P2O60397 106 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 ZNF705DP0CH99 300 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 ZNF705BP0CI00 300 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 RHOBP62745 196 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 BAXQ07812 192 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 FAM210BQ96KR6 192 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 SCRT1Q9BWW7 348 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 ARV1Q9H2C2 271 aa11.95□□□□□ -0.5
PDLIM2-217ENST00000491330 AGPAT2O15120 278 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 CCNKO75909 580 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 PTTG1O95997 202 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 INSP01308 110 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 CXCL2P19875 107 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 IGF2BP2-AS1Q96M15 143 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 SLC35B3Q9H1N7 401 aa11.94□□□□□ -0.5
PDLIM2-217ENST00000491330 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms