RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 BTF3P20290 206 aaKnown RBP14.38□□□□□ -0.11
CLIP2-208ENST00000491075 S100A7P31151 101 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 LYZL2Q7Z4W2 148 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 OR1S1Q8NH92 325 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 SMIM4Q8WVI0 70 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 C16orf74Q96GX8 76 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 Q9H3A6 140 aa14.38□□□□□ -0.11
CLIP2-208ENST00000491075 TRAV12-2A0A075B6T6 113 aa14.37□□□□□ -0.11
CLIP2-208ENST00000491075 KRTAP10-2P60368 255 aa14.37□□□□□ -0.11
CLIP2-208ENST00000491075 SRPXP78539 464 aa14.37□□□□□ -0.11
CLIP2-208ENST00000491075 OR51S1Q8NGJ8 323 aa14.37□□□□□ -0.11
CLIP2-208ENST00000491075 KRTAP1-5Q9BYS1 174 aa14.37□□□□□ -0.11
CLIP2-208ENST00000491075 TIMM8BQ9Y5J9 83 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-208ENST00000491075 TRAV8-2A0A0B4J237 113 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 TAS2R60P59551 318 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 IGFL4Q6B9Z1 124 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 RNF182Q8N6D2 247 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 ZNF738Q8NE65 137 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 BPIFCQ8NFQ6 507 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 SCGB3A2Q96PL1 93 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 LINC01587Q99440 93 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 TMEM147Q9BVK8 224 aa14.36□□□□□ -0.11
CLIP2-208ENST00000491075 SLC25A39Q9BZJ4 359 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-208ENST00000491075 PIGBOS1A0A0B4J2F0 54 aa14.35□□□□□ -0.11
CLIP2-208ENST00000491075 ORM2P19652 201 aa14.35□□□□□ -0.11
CLIP2-208ENST00000491075 CLVS1Q8IUQ0 354 aaPredicted RBP14.35□□□□□ -0.11
CLIP2-208ENST00000491075 MIXL1Q9H2W2 232 aa14.35□□□□□ -0.11
CLIP2-208ENST00000491075 A0A1W2PPQ1 181 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 IAPPP10997 89 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 ANXA3P12429 323 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 ZNF493Q6ZR52 646 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 OR10J6PQ8NGY7 276 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 GNPNAT1Q96EK6 184 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-208ENST00000491075 ZNF503Q96F45 646 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 UPK3BQ9BT76 320 aa14.34□□□□□ -0.11
CLIP2-208ENST00000491075 PAIP2BQ9ULR5 123 aaKnown RBP14.34□□□□□ -0.11
CLIP2-208ENST00000491075 DMBT1Q9UGM3 2413 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-208ENST00000491075 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 RGS5O15539 181 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 RHOBP62745 196 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 FGL1Q08830 312 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 CTF1Q16619 201 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 PPP1R14DQ9NXH3 145 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 SCP2D1Q9UJQ7 156 aa14.33□□□□□ -0.12
CLIP2-208ENST00000491075 DUXBA0A1W2PPF3 345 aa14.32□□□□□ -0.12
CLIP2-208ENST00000491075 PITX3O75364 302 aa14.32□□□□□ -0.12
CLIP2-208ENST00000491075 HTN1P15515 57 aa14.32□□□□□ -0.12
CLIP2-208ENST00000491075 HIST1H1AQ02539 215 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-208ENST00000491075 RNASE8Q8TDE3 154 aaKnown RBP14.32□□□□□ -0.12
CLIP2-208ENST00000491075 RXFP4Q8TDU9 374 aa14.32□□□□□ -0.12
CLIP2-208ENST00000491075 TMEM263Q8WUH6 116 aaKnown RBP14.32□□□□□ -0.12
CLIP2-208ENST00000491075 NOP10Q9NPE3 64 aaKnown RBP14.32□□□□□ -0.12
CLIP2-208ENST00000491075 TRAV26-1A0A087WT03 109 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 PRSS46E5RG02 174 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 CTDSPLO15194 276 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 M6PRP20645 277 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 GATA2P23769 480 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-208ENST00000491075 RPP30P78346 268 aaKnown RBP14.31□□□□□ -0.12
CLIP2-208ENST00000491075 OR5I1Q13606 314 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 OR8A1Q8NGG7 326 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 UHRF2Q96PU4 802 aa14.31□□□□□ -0.12
CLIP2-208ENST00000491075 CIB3Q96Q77 187 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-208ENST00000491075 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
CLIP2-208ENST00000491075 ANKRD20A5PA0PJZ0 165 aa14.3□□□□□ -0.12
CLIP2-208ENST00000491075 H3BRN7 92 aa14.3□□□□□ -0.12
CLIP2-208ENST00000491075 MED6O75586 246 aa14.3□□□□□ -0.12
CLIP2-208ENST00000491075 ADAP1O75689 374 aa14.3□□□□□ -0.12
CLIP2-208ENST00000491075 RPL7P18124 248 aaKnown RBP14.3□□□□□ -0.12
CLIP2-208ENST00000491075 AKR1C1Q04828 323 aa14.3□□□□□ -0.12
CLIP2-208ENST00000491075 TMEM182Q6ZP80 229 aaPredicted RBP14.3□□□□□ -0.12
CLIP2-208ENST00000491075 MRPS16Q9Y3D3 137 aaKnown RBP14.3□□□□□ -0.12
CLIP2-208ENST00000491075 SLC25A6P12236 298 aa14.29□□□□□ -0.12
CLIP2-208ENST00000491075 CDKN1BP46527 198 aa14.29□□□□□ -0.12
CLIP2-208ENST00000491075 SHANK2-AS3Q9BTD1 123 aa14.29□□□□□ -0.12
CLIP2-208ENST00000491075 RABL2AQ9UBK7 228 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-208ENST00000491075 RABL2BQ9UNT1 228 aa14.29□□□□□ -0.12
CLIP2-208ENST00000491075 H7BYZ3 331 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 ZNF701M0R085 212 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-208ENST00000491075 CXCL3P19876 107 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 RAP2BP61225 183 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 IL18Q14116 193 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 ESRGQ1W209 222 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 LINC00612Q8N6U2 182 aa14.28□□□□□ -0.12
CLIP2-208ENST00000491075 A0A087X0K7 114 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 A0A0J9YY99 117 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 H3BNG1 76 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 CTDSP2O14595 271 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 DLK1P80370 383 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 PSG3Q16557 428 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 C20orf144Q9BQM9 153 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 MCUBQ9NWR8 336 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 ZNF586Q9NXT0 402 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 HIGD1AQ9Y241 93 aa14.27□□□□□ -0.13
CLIP2-208ENST00000491075 SYNGR2O43760 224 aa14.26□□□□□ -0.13
CLIP2-208ENST00000491075 ACOT7LQ6ZUV0 252 aa14.26□□□□□ -0.13
CLIP2-208ENST00000491075 LRRC20Q8TCA0 184 aa14.26□□□□□ -0.13
CLIP2-208ENST00000491075 PTTG2Q9NZH5 202 aa14.26□□□□□ -0.13
CLIP2-208ENST00000491075 WRBO00258 174 aa14.25□□□□□ -0.13
CLIP2-208ENST00000491075 INAFM2P0DMQ5 153 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms