RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ATP6V1F	Q16864	119 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663		Q5BKY6	102 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	GDF5OS	Q5U4N7	250 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	STH	Q8IWL8	128 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	TMEM37	Q8WXS4	190 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	C20orf173	Q96LM9	149 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	OVOL2	Q9BRP0	275 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	HSPB11	Q9Y547	144 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	PXMP4	Q9Y6I8	212 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	PET100	P0DJ07	73 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	RPL12	P30050	165 aa	Known RBP	13.64	□□□□□ -0.23
C4A-256	ENST00000490663	PRR20E	P86478	221 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	PRR20C	P86479	221 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	PRR20D	P86480	221 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	PRR20B	P86481	221 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	PRR20A	P86496	221 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	LINC00305	Q7Z4B0	112 aa		13.64	□□□□□ -0.23
C4A-256	ENST00000490663	TRAV5	A0A0B4J249	113 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663		F6UB75	175 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663		H3BTX0	84 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	ATF4	P18848	351 aa	Predicted RBP	13.63	□□□□□ -0.23
C4A-256	ENST00000490663	HLA-DMB	P28068	263 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	B2M	P61769	119 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	SNRPD3	P62318	126 aa	Known RBP	13.63	□□□□□ -0.23
C4A-256	ENST00000490663	RAB31	Q13636	194 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	GCSAML	Q5JQS6	135 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	C10orf113	Q5VZT2	155 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	TRPT1	Q86TN4	253 aa	Known RBP	13.63	□□□□□ -0.23
C4A-256	ENST00000490663	C16orf92	Q96LL3	132 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	NPCDR1	Q9BY65	106 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	SLC39A9	Q9NUM3	307 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	RFNG	Q9Y644	331 aa		13.63	□□□□□ -0.23
C4A-256	ENST00000490663	CA1	P00915	261 aa	Predicted RBP	13.62	□□□□□ -0.23
C4A-256	ENST00000490663	IGKV3-20	P01619	116 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	C4BPB	P20851	252 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	RNF182	Q8N6D2	247 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	CSTL1	Q9H114	145 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	EDA2R	Q9HAV5	297 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	WFDC1	Q9HC57	220 aa		13.62	□□□□□ -0.23
C4A-256	ENST00000490663	KIR2DL5B	A0A0G2JN68	375 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	KIR2DL5B	A0A0G2JPC4	375 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	SPRY2	O43597	315 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	LYL1	P12980	280 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	RPL29	P47914	159 aa	Known RBP	13.61	□□□□□ -0.23
C4A-256	ENST00000490663	PSMB3	P49720	205 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	KIR2DL5A	Q8N109	375 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	KIR2DL5B	Q8NHK3	375 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	ATP5S	Q99766	215 aa		13.61	□□□□□ -0.23
C4A-256	ENST00000490663	WDR61	Q9GZS3	305 aa	Known RBP	13.61	□□□□□ -0.23
C4A-256	ENST00000490663	TRAV8-2	A0A0B4J237	113 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	MRPS12	O15235	138 aa	Known RBP	13.6	□□□□□ -0.23
C4A-256	ENST00000490663	RPL7	P18124	248 aa	Known RBP	13.6	□□□□□ -0.23
C4A-256	ENST00000490663	ID1	P41134	155 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	FXYD7	P58549	80 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	PXDC1	Q5TGL8	231 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663		Q6ZRG5	221 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	GPR82	Q96P67	336 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	CLEC5A	Q9NY25	188 aa		13.6	□□□□□ -0.23
C4A-256	ENST00000490663	UBE2C	O00762	179 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663	ISLR	O14498	428 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663	GIG44	P09565	113 aa	Predicted RBP	13.59	□□□□□ -0.23
C4A-256	ENST00000490663	GIP	P09681	153 aa	Predicted RBP	13.59	□□□□□ -0.23
C4A-256	ENST00000490663	SPATA31B1P	Q5VZV4	182 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663		Q6ZWC4	215 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663	RNF183	Q96D59	192 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663	DNAJC4	Q9NNZ3	241 aa		13.59	□□□□□ -0.23
C4A-256	ENST00000490663		H3BMM0	161 aa		13.58	□□□□□ -0.24
C4A-256	ENST00000490663	ZNF705D	P0CH99	300 aa	Predicted RBP	13.58	□□□□□ -0.24
C4A-256	ENST00000490663	ZNF705B	P0CI00	300 aa	Predicted RBP	13.58	□□□□□ -0.24
C4A-256	ENST00000490663	S100A7	P31151	101 aa		13.58	□□□□□ -0.24
C4A-256	ENST00000490663	MEOX2	P50222	304 aa		13.58	□□□□□ -0.24
C4A-256	ENST00000490663	OR1L4	Q8NGR5	311 aa		13.58	□□□□□ -0.24
C4A-256	ENST00000490663	CHAC2	Q8WUX2	184 aa		13.58	□□□□□ -0.24
C4A-256	ENST00000490663	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.57	□□□□□ -0.24
C4A-256	ENST00000490663	SMLR1	H3BR10	107 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	SLC17A3	O00476	420 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	MPDU1	O75352	247 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	HLA-DRB4	P13762	266 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	ZFAND6	Q6FIF0	208 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	OR4B1	Q8NGF8	309 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	PFDN5	Q99471	154 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	SAV1	Q9H4B6	383 aa	Predicted RBP	13.57	□□□□□ -0.24
C4A-256	ENST00000490663	SEPSECS	Q9HD40	501 aa	Known RBP	13.57	□□□□□ -0.24
C4A-256	ENST00000490663	HLA-DRB4	X5D2U9	266 aa		13.57	□□□□□ -0.24
C4A-256	ENST00000490663	TENM2	Q9NT68	2774 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663	FXYD6-FXYD2	A0A087WZ82	144 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663		A0A087X0K7	114 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663		A0A0J9YWU9	116 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663		G3V3Q6	166 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663	EIF3G	O75821	320 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
C4A-256	ENST00000490663	MIR17HG	Q75NE6	70 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663	CSMD3	Q7Z407	3707 aa		13.56	□□□□□ -0.24
C4A-256	ENST00000490663		H3BQ15	152 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	PYY	P10082	97 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	FOXI2	Q6ZQN5	318 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	S100A7A	Q86SG5	101 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	BPIFA4P	Q86YQ2	179 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	ZNF709	Q8N972	641 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	ZNF738	Q8NE65	137 aa		13.55	□□□□□ -0.24
C4A-256	ENST00000490663	OR2T35	Q8NGX2	323 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms