RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ARL16Q0P5N6 197 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 RBMY1FQ15415 496 aaKnown RBP14.32□□□□□ -0.12
SMC4-222ENST00000490207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 ENKURQ8TC29 256 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 C2orf50Q96LR7 162 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 SHANK2-AS3Q9BTD1 123 aa14.32□□□□□ -0.12
SMC4-222ENST00000490207 UPK1BO75841 260 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 OR5G3P0C626 314 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 BCAP31P51572 246 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 SPATA31B1PQ5VZV4 182 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 C20orf173Q96LM9 149 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 C17orf77Q96MU5 243 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 GGACTQ9BVM4 153 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 RPRMQ9NS64 109 aa14.31□□□□□ -0.12
SMC4-222ENST00000490207 DEDDO75618 318 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 CAV2P51636 162 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 S100A10P60903 97 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 EBLN2Q6P2I7 272 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 ZNF546Q86UE3 836 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 OR4B1Q8NGF8 309 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 UHRF2Q96PU4 802 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 ARL6Q9H0F7 186 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
SMC4-222ENST00000490207 F6UB75 175 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 AGPAT2O15120 278 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 RPL7P18124 248 aaKnown RBP14.29□□□□□ -0.12
SMC4-222ENST00000490207 PVALBP20472 110 aaPredicted RBP14.29□□□□□ -0.12
SMC4-222ENST00000490207 FXYD7P58549 80 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 S100A7AQ86SG5 101 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 CLUHP3Q96NS8 147 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 HRH4Q9H3N8 390 aa14.29□□□□□ -0.12
SMC4-222ENST00000490207 A0A0J9YX75 114 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 GOSR2O14653 212 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 LY6G6CO95867 125 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 FGL1Q08830 312 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 FAM78BQ5VT40 261 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 ZNF709Q8N972 641 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 ARV1Q9H2C2 271 aa14.28□□□□□ -0.12
SMC4-222ENST00000490207 ELOA3CA0A087WX78 387 aaPredicted RBP14.27□□□□□ -0.13
SMC4-222ENST00000490207 FAM24AA6NFZ4 105 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 CST7O76096 145 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 RAB32Q13637 225 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 PXDC1Q5TGL8 231 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 MGST2Q99735 147 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 SLC35B3Q9H1N7 401 aa14.27□□□□□ -0.13
SMC4-222ENST00000490207 GPN1Q9HCN4 374 aaPredicted RBP14.27□□□□□ -0.13
SMC4-222ENST00000490207 PSG9Q00887 426 aa14.26□□□□□ -0.13
SMC4-222ENST00000490207 IFITM3Q01628 133 aa14.26□□□□□ -0.13
SMC4-222ENST00000490207 PATE2Q6UY27 113 aa14.26□□□□□ -0.13
SMC4-222ENST00000490207 ZNF705AQ6ZN79 300 aaPredicted RBP14.26□□□□□ -0.13
SMC4-222ENST00000490207 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
SMC4-222ENST00000490207 RNF24Q9Y225 148 aa14.26□□□□□ -0.13
SMC4-222ENST00000490207 A0A087X0K7 114 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 TRAV8-2A0A0B4J237 113 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 IL15RAQ13261 267 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 IGFL4Q6B9Z1 124 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 RNF182Q8N6D2 247 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 C2CD4CQ8TF44 421 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 UQCC1Q9NVA1 299 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 CELA1Q9UNI1 258 aa14.25□□□□□ -0.13
SMC4-222ENST00000490207 IGHV3OR16-12A0A075B7B8 117 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 C11orf94C9JXX5 98 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 COX7A2P2O60397 106 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 HLA-DMBP28068 263 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 SULT1A1P50225 295 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 STX12Q86Y82 276 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 NEU1Q99519 415 aa14.24□□□□□ -0.13
SMC4-222ENST00000490207 UBE2L5PA0A1B0GUS4 154 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 IGSF23A1L1A6 192 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 A8MTW9 85 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 ZNF705FA8MVS1 300 aaPredicted RBP14.23□□□□□ -0.13
SMC4-222ENST00000490207 ZNF705DP0CH99 300 aaPredicted RBP14.23□□□□□ -0.13
SMC4-222ENST00000490207 ZNF705BP0CI00 300 aaPredicted RBP14.23□□□□□ -0.13
SMC4-222ENST00000490207 CAMLGP49069 296 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 RAB31Q13636 194 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 Q6ZTC4 211 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 LINC00305Q7Z4B0 112 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 NRARPQ7Z6K4 114 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 ZNF738Q8NE65 137 aa14.23□□□□□ -0.13
SMC4-222ENST00000490207 PRAF2O60831 178 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 DUSP14O95147 198 aaKnown RBP14.22□□□□□ -0.13
SMC4-222ENST00000490207 BAXQ07812 192 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 VWC2Q2TAL6 325 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 TMEM252Q8N6L7 170 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 LRRC20Q8TCA0 184 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 WDR83OSQ9Y284 106 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 GOLT1BQ9Y3E0 138 aa14.22□□□□□ -0.13
SMC4-222ENST00000490207 SMIM9A6NGZ8 99 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 INMT-MINDY4F8WBC2 141 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 MRPS12O15235 138 aaKnown RBP14.21□□□□□ -0.13
SMC4-222ENST00000490207 S100A11P31949 105 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 CNN1P51911 297 aaKnown RBP14.21□□□□□ -0.13
SMC4-222ENST00000490207 HBG1P69891 147 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 HBG2P69892 147 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 C10orf113Q5VZT2 155 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 MIC13Q5XKP0 118 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 AMTNQ6UX39 209 aa14.21□□□□□ -0.13
SMC4-222ENST00000490207 TRAV10A0A0B4J240 114 aa14.2□□□□□ -0.14
SMC4-222ENST00000490207 SIX6O95475 246 aa14.2□□□□□ -0.14
SMC4-222ENST00000490207 CXCL2P19875 107 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms