RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ATP5G3P48201 142 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 SOHLH1Q5JUK2 328 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 CYB561D1Q8N8Q1 229 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 KLHL30-AS1Q8NEE0 82 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 SUN5Q8TC36 379 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 BLNKQ8WV28 456 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 GRAMD2BQ96HH9 432 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 LINC00052Q96N35 136 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 GPR82Q96P67 336 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
USP11-211ENST00000489111 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 A0A087WW49 117 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 A0A1W2PRE2 83 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 CLPSL1A2RUU4 121 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 NBEAP1P0C6P0 100 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 CD28P10747 220 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 CRYBB3P26998 211 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 BMI1P35226 326 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 GALR1P47211 349 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 CD81P60033 236 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 TCTEX1D4Q5JR98 221 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 C1orf194Q5T5A4 169 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 GPHB5Q86YW7 130 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 C11orf44Q8N8P7 122 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
USP11-211ENST00000489111 WFDC12Q8WWY7 111 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 DPF1Q92782 380 aa7.69□□□□□ -1.18
USP11-211ENST00000489111 NKX6-2Q9C056 277 aaPredicted RBP7.69□□□□□ -1.18
USP11-211ENST00000489111 DAZ1Q9NQZ3 744 aaKnown RBP7.69□□□□□ -1.18
USP11-211ENST00000489111 NSD1Q96L73 2696 aaPredicted RBP7.69□□□□□ -1.18
USP11-211ENST00000489111 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 IGHV3-49A0A0A0MS15 119 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 IGHV3-66A0A0C4DH42 116 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 A0A1B0GUS0 222 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 A0A1W2PRX2 142 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 A0A1W2PS18 150 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 LINC01619G3V211 115 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 H3BTX0 84 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 NDUFS6O75380 124 aaKnown RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 APOC3P02656 99 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 SNRPCP09234 159 aaKnown RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 IGLC2P0DOY2 106 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 HOXD3P31249 432 aaPredicted RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 RANP62826 216 aaKnown RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 SRSF2Q01130 221 aaKnown RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 SEC11CQ9BY50 192 aa7.68□□□□□ -1.18
USP11-211ENST00000489111 TSSC4Q9Y5U2 329 aaPredicted RBP7.68□□□□□ -1.18
USP11-211ENST00000489111 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 IGHV7-4-1A0A0J9YVY3 117 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 ZNF785A8K8V0 405 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 GGTLC3B5MD39 225 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 H3BQ15 152 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 K7EMT4 169 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 BUB3O43684 328 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 SYNJ2BPP57105 145 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 PROK1P58294 105 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 SUMO1P63165 101 aaKnown RBP7.67□□□□□ -1.18
USP11-211ENST00000489111 PDE6HQ13956 83 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 ZNF674Q2M3X9 581 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 DEFB136Q30KP8 78 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 REC114Q7Z4M0 266 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 OR1N2Q8NGR9 330 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 RPUSD4Q96CM3 377 aaKnown RBP7.67□□□□□ -1.18
USP11-211ENST00000489111 CITED2Q99967 270 aaPredicted RBP7.67□□□□□ -1.18
USP11-211ENST00000489111 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 ELOVL1Q9BW60 279 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 ZNF586Q9NXT0 402 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 CARHSP1Q9Y2V2 147 aaKnown RBP7.67□□□□□ -1.18
USP11-211ENST00000489111 U3KQE9 123 aa7.67□□□□□ -1.18
USP11-211ENST00000489111 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 A8MWP6 167 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 M0QZ24 198 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 LGALS9O00182 355 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
USP11-211ENST00000489111 APOHP02749 345 aaPredicted RBP7.66□□□□□ -1.18
USP11-211ENST00000489111 SLC25A5P05141 298 aaKnown RBP7.66□□□□□ -1.18
USP11-211ENST00000489111 MEOX2P50222 304 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 TM4SF20Q53R12 229 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 SIGLEC15Q6ZMC9 328 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 C8orf86Q6ZUL3 223 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 SVBPQ8N300 66 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 OR11H1Q8NG94 326 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 CMTM2Q8TAZ6 248 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 SMIM7Q9BQ49 75 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 Q9H3A6 140 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 OTORQ9NRC9 128 aa7.66□□□□□ -1.18
USP11-211ENST00000489111 FN1P02751 2386 aaKnown RBP7.66□□□□□ -1.18
USP11-211ENST00000489111 A0A087X0K7 114 aa7.65□□□□□ -1.18
USP11-211ENST00000489111 PGPA6NDG6 321 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms