RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 FNDC10F2Z333 226 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 L7N2F9 121 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 DEFB4AO15263 64 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 FGF7P21781 194 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 VAMP2P63027 116 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 DCTN2Q13561 401 aaKnown RBP4.74□□□□□ -1.65
PTPRD-212ENST00000488774 KIR3DS1Q14943 382 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 ACTL10Q5JWF8 245 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 LAMTOR1Q6IAA8 161 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 TEPPQ6URK8 271 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 ZNF709Q8N972 641 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 CSNK1G2-AS1Q8NCQ2 148 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 OR11H4Q8NGC9 324 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 ZNF503Q96F45 646 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 FAM167A-AS1Q96KT0 104 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 RSG1Q9BU20 258 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 PARD6GQ9BYG4 376 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-212ENST00000488774 ARV1Q9H2C2 271 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 NPVFQ9HCQ7 196 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 ZMAT5Q9UDW3 170 aaKnown RBP4.74□□□□□ -1.65
PTPRD-212ENST00000488774 CACFD1Q9UGQ2 172 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 HSPB11Q9Y547 144 aa4.74□□□□□ -1.65
PTPRD-212ENST00000488774 DNAH2Q9P225 4427 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 NACAE9PAV3 2078 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 TRAV2A0A0B4J234 112 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 RNF222A6NCQ9 220 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 HELTA6NFD8 242 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 E5RGE8 158 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 H3BMM0 161 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 DNASE2O00115 360 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 IGKV3-20P01619 116 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 OR5G3P0C626 314 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 RBMY1A1P0DJD3 496 aaKnown RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 RBMY1CP0DJD4 496 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 PYYP10082 97 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 CAMLGP49069 296 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 RPP30P78346 268 aaKnown RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 CD300CQ08708 224 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 RBMY1FQ15415 496 aaKnown RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 ZFAND6Q6FIF0 208 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 AMTNQ6UX39 209 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 Q6ZQT7 251 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 MIR17HGQ75NE6 70 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 SSX7Q7RTT5 188 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 LINC00305Q7Z4B0 112 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 TMEM147Q9BVK8 224 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 NPCDR1Q9BY65 106 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 SLC35B3Q9H1N7 401 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
PTPRD-212ENST00000488774 NRN1Q9NPD7 142 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 SLC39A9Q9NUM3 307 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 UQCC1Q9NVA1 299 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 ZNF586Q9NXT0 402 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 HIGD1AQ9Y241 93 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 PXMP4Q9Y6I8 212 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 X6R8D5 127 aa4.73□□□□□ -1.65
PTPRD-212ENST00000488774 DNAH10Q8IVF4 4471 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 PIGBOS1A0A0B4J2F0 54 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 A0A0J9YWU9 116 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 A0A1B0GVG6 124 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 A0A1W2PS18 150 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 A8MTW9 85 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 HYPMO75409 117 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 NDUFB4O95168 129 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 IGLC2P0DOY2 106 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 RPL12P30050 165 aaKnown RBP4.72□□□□□ -1.65
PTPRD-212ENST00000488774 BAXQ07812 192 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 RGS21Q2M5E4 152 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 OR8I2Q8N0Y5 310 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 RNF183Q96D59 192 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-212ENST00000488774 GRAMD2BQ96HH9 432 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 LINC00052Q96N35 136 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 WWC2-AS2Q96NR7 200 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 GGACTQ9BVM4 153 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 SLC25A2Q9BXI2 301 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 WDR61Q9GZS3 305 aaKnown RBP4.72□□□□□ -1.65
PTPRD-212ENST00000488774 MED28Q9H204 178 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 SH3BGRL3Q9H299 93 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 FBXL17Q9UF56 701 aa4.72□□□□□ -1.65
PTPRD-212ENST00000488774 ELOA3CA0A087WX78 387 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-212ENST00000488774 A0A087X0K7 114 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 A0A0J9YX75 114 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 CRXO43186 299 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-212ENST00000488774 CA1P00915 261 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-212ENST00000488774 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 S100A11P31949 105 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 RPL29P47914 159 aaKnown RBP4.71□□□□□ -1.66
PTPRD-212ENST00000488774 B2MP61769 119 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 CASC10Q5T4H9 136 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 FAM78BQ5VT40 261 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 Q8NAQ8 132 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 PPP1R14BQ96C90 147 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 CSTL1Q9H114 145 aa4.71□□□□□ -1.66
PTPRD-212ENST00000488774 SAV1Q9H4B6 383 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-212ENST00000488774 TMEM231Q9H6L2 316 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms