RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ARL6Q9H0F7 186 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-209ENST00000488627 OR5G3P0C626 314 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 S100A7P31151 101 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 S100A11P31949 105 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 ZNF546Q86UE3 836 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 SAV1Q9H4B6 383 aaPredicted RBP11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
CTDSP1-209ENST00000488627 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 MEOX2P50222 304 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 CYCSP99999 105 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 PXDC1Q5TGL8 231 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 TMEM37Q8WXS4 190 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 SACSQ9NZJ4 4579 aa11.59□□□□□ -0.55
CTDSP1-209ENST00000488627 ZNF705EA8MWA4 302 aaPredicted RBP11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 RPL7P18124 248 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 CAMLGP49069 296 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 PRR20EP86478 221 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 PRR20CP86479 221 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 PRR20DP86480 221 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 PRR20BP86481 221 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 PRR20AP86496 221 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 NHLH2Q02577 135 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 CHAC2Q8WUX2 184 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 X6R8D5 127 aa11.58□□□□□ -0.56
CTDSP1-209ENST00000488627 F6UB75 175 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 ATP6V1FQ16864 119 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 MORN5Q5VZ52 161 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 MIC13Q5XKP0 118 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 IGFL4Q6B9Z1 124 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 STX12Q86Y82 276 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 Q8NAQ8 132 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 PPP1R1CQ8WVI7 109 aa11.57□□□□□ -0.56
CTDSP1-209ENST00000488627 ELOA3CA0A087WX78 387 aaPredicted RBP11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 A0A087X0K7 114 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 A0A0J9YX75 114 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 E5RGE8 158 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 DEFB4AO15263 64 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 SSNA1O43805 119 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 RLN2P04090 185 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 HBG1P69891 147 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 HBG2P69892 147 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 RAB31Q13636 194 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 LRRC37A5PQ49AS3 106 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 SPATA31B1PQ5VZV4 182 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 ZNF709Q8N972 641 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 DNAJC4Q9NNZ3 241 aa11.56□□□□□ -0.56
CTDSP1-209ENST00000488627 LCE6AA0A183 80 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 UBE2L5PA0A1B0GUS4 154 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 A8MTW9 85 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 OPCMLQ14982 345 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 FAM78BQ5VT40 261 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 RPRMQ9NS64 109 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 XCL2Q9UBD3 114 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 RYR2Q92736 4967 aa11.55□□□□□ -0.56
CTDSP1-209ENST00000488627 COX7A2P2O60397 106 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 MPC2O95563 127 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 PTTG1O95997 202 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 CXCL3P19876 107 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 FGL1Q08830 312 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 C10orf113Q5VZT2 155 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 EBLN2Q6P2I7 272 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 Q6ZRG5 221 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 RNF182Q8N6D2 247 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 SLC25A31Q9H0C2 315 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 SLC39A9Q9NUM3 307 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
CTDSP1-209ENST00000488627 IGHV4-28A0A0C4DH34 117 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 MIFP14174 115 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 FGF7P21781 194 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 FXYD7P58549 80 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 B2MP61769 119 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 BAXQ07812 192 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 AMTNQ6UX39 209 aa11.53□□□□□ -0.56
CTDSP1-209ENST00000488627 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms