RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 INE1O15225 51 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 GGCTO75223 188 aaKnown RBP0.66□□□□□ -2.3
CD46-215ENST00000488596 DNAL4O96015 105 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 APOA2P02652 100 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 CRHP06850 196 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 SRP14P37108 136 aaKnown RBP0.66□□□□□ -2.3
CD46-215ENST00000488596 CRYBA4P53673 196 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 UBE2BP63146 152 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 SNCBQ16143 134 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 AKR1C8PQ5T2L2 129 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 BCL2L15Q5TBC7 163 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 GRINAQ7Z429 371 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 STX19Q8N4C7 294 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.66□□□□□ -2.3
CD46-215ENST00000488596 TEX47Q8TBZ9 253 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 ZHX1-C8orf76Q96EF9 292 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 TMEM70Q9BUB7 260 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 BOLA2Q9H3K6 86 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 UFC1Q9Y3C8 167 aa0.66□□□□□ -2.3
CD46-215ENST00000488596 NUP210Q8TEM1 1887 aaPredicted RBP0.66□□□□□ -2.3
CD46-215ENST00000488596 SCN3AQ9NY46 2000 aa0.65□□□□□ -2.3
CD46-215ENST00000488596 CD109Q6YHK3 1445 aa0.65□□□□□ -2.3
CD46-215ENST00000488596 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.3
CD46-215ENST00000488596 MYO5AQ9Y4I1 1855 aaKnown RBP0.65□□□□□ -2.3
CD46-215ENST00000488596 TRGV10A0A0A0MS01 117 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 DUXBA0A1W2PPF3 345 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 TMEM256-PLSCR3K7ERE1 68 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 GPR31O00270 319 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 CSN2P05814 226 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 IDO1P14902 403 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 DR1Q01658 176 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 SCGB2B2Q4G0G5 96 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 SMIM15Q7Z3B0 74 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 PDZD9Q8IXQ8 264 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 IFT20Q8IY31 132 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 EXOC3-AS1Q8N2X6 119 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 TMEM254Q8TBM7 123 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 CANT1Q8WVQ1 401 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 ANP32BQ92688 251 aaKnown RBP0.65□□□□□ -2.31
CD46-215ENST00000488596 BORCS5Q969J3 196 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 MALSU1Q96EH3 234 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 YPEL2Q96QA6 119 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 LYSMD1Q96S90 227 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 OR2J1Q9GZK6 312 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 PBOV1Q9GZY1 135 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 CENPHQ9H3R5 247 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 SMPXQ9UHP9 88 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 PCTPQ9UKL6 214 aa0.65□□□□□ -2.31
CD46-215ENST00000488596 HEATR1Q9H583 2144 aaKnown RBP0.65□□□□□ -2.31
CD46-215ENST00000488596 TRPM1Q7Z4N2 1603 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 MAP1LC3B2A6NCE7 125 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 H0YJX3 145 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 M0R378 163 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 NDUFB3O43676 98 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 PFDN1O60925 122 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 IFNA21P01568 189 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 IFNA14P01570 189 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 TRGC2P03986 189 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 OGNP20774 298 aaKnown RBP0.64□□□□□ -2.31
CD46-215ENST00000488596 NFYBP25208 207 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 GLRXP35754 106 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 DYNLT3P51808 116 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 C22orf39Q6P5X5 142 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 CROCCP2Q86T23 111 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 FAM24BQ8N5W8 94 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 PLEKHB2Q96CS7 222 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 LINC00467Q9BRT7 94 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 MAP1LC3BQ9GZQ8 125 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 TMEM126AQ9H061 195 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 MRPL40Q9NQ50 206 aaKnown RBP0.64□□□□□ -2.31
CD46-215ENST00000488596 TAS2R7Q9NYW3 318 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 CEP164Q9UPV0 1460 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 PLXNA4Q9HCM2 1894 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 VIRMAQ69YN4 1812 aaKnown RBP0.64□□□□□ -2.31
CD46-215ENST00000488596 ARHGEF11O15085 1522 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 TECPR2O15040 1411 aa0.64□□□□□ -2.31
CD46-215ENST00000488596 ANKRD30AQ9BXX3 1397 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 GNG14A0A1W2PPG7 69 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 ODAMA1E959 279 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 TLCD2A6NGC4 264 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 CCL25O15444 150 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 CD2P06729 351 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 PRB4P10163 310 aaPredicted RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 INSL3P51460 131 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 TFAMQ00059 246 aaKnown RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 MYL5Q02045 173 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 LTC4SQ16873 150 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 FAM74A1Q5RGS3 127 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 TMEM78Q5T7P6 136 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 DCUN1D2Q6PH85 259 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 AKAP14Q86UN6 197 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 ST6GALNAC3Q8NDV1 305 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 OR2T35Q8NGX2 323 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 OR10K1Q8NGX5 313 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 PPTC7Q8NI37 304 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 DYDC1Q8WWB3 177 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 PATE1Q8WXA2 126 aa0.63□□□□□ -2.31
CD46-215ENST00000488596 GPX7Q96SL4 187 aaPredicted RBP0.63□□□□□ -2.31
CD46-215ENST00000488596 AMELYQ99218 206 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms