RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 RPP30P78346 268 aaKnown RBP13.33□□□□□ -0.27
GGPS1-206ENST00000488594 TMEM256Q8N2U0 113 aa13.33□□□□□ -0.27
GGPS1-206ENST00000488594 BPIFCQ8NFQ6 507 aa13.33□□□□□ -0.27
GGPS1-206ENST00000488594 TMEM147Q9BVK8 224 aa13.33□□□□□ -0.27
GGPS1-206ENST00000488594 PAIP2BQ9ULR5 123 aaKnown RBP13.33□□□□□ -0.27
GGPS1-206ENST00000488594 LINC00588Q9Y4M8 146 aa13.33□□□□□ -0.27
GGPS1-206ENST00000488594 ANKRD20A5PA0PJZ0 165 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 CTDSP2O14595 271 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 PITX3O75364 302 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 MED6O75586 246 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 ORM2P19652 201 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 IL18Q14116 193 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 CLINT1Q14677 625 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 BAP18Q8IXM2 172 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 CIB3Q96Q77 187 aaPredicted RBP13.32□□□□□ -0.28
GGPS1-206ENST00000488594 BOLA2-SMG1P6H3BVE0 249 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 IAPPP10997 89 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 TAS2R60P59551 318 aa13.32□□□□□ -0.28
GGPS1-206ENST00000488594 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 SLC25A6P12236 298 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 AZU1P20160 251 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 FCN2Q15485 313 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 TTC32Q5I0X7 151 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 SSX7Q7RTT5 188 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 SPATA12Q7Z6I5 190 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 RNF141Q8WVD5 230 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 C16orf74Q96GX8 76 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 DIRAS2Q96HU8 199 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 LINC01587Q99440 93 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 MCUBQ9NWR8 336 aa13.31□□□□□ -0.28
GGPS1-206ENST00000488594 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-206ENST00000488594 TRAV12-2A0A075B6T6 113 aa13.3□□□□□ -0.28
GGPS1-206ENST00000488594 FGL1Q08830 312 aa13.3□□□□□ -0.28
GGPS1-206ENST00000488594 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
GGPS1-206ENST00000488594 Q9H8V8 135 aa13.3□□□□□ -0.28
GGPS1-206ENST00000488594 SCRT2Q9NQ03 307 aa13.3□□□□□ -0.28
GGPS1-206ENST00000488594 PRSS46E5RG02 174 aa13.29□□□□□ -0.28
GGPS1-206ENST00000488594 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
GGPS1-206ENST00000488594 IGFL4Q6B9Z1 124 aa13.29□□□□□ -0.28
GGPS1-206ENST00000488594 ZNF493Q6ZR52 646 aa13.29□□□□□ -0.28
GGPS1-206ENST00000488594 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-206ENST00000488594 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
GGPS1-206ENST00000488594 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 GATA2P23769 480 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-206ENST00000488594 RHOBP62745 196 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 AKR1C1Q04828 323 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 TMEM144Q7Z5S9 345 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 ZNF503Q96F45 646 aa13.28□□□□□ -0.28
GGPS1-206ENST00000488594 RSL24D1Q9UHA3 163 aaKnown RBP13.28□□□□□ -0.28
GGPS1-206ENST00000488594 H3BRN7 92 aa13.27□□□□□ -0.29
GGPS1-206ENST00000488594 BTF3P20290 206 aaKnown RBP13.27□□□□□ -0.29
GGPS1-206ENST00000488594 RAP2BP61225 183 aa13.27□□□□□ -0.29
GGPS1-206ENST00000488594 HIST1H1AQ02539 215 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-206ENST00000488594 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
GGPS1-206ENST00000488594 TMEM182Q6ZP80 229 aaPredicted RBP13.27□□□□□ -0.29
GGPS1-206ENST00000488594 LRTM2Q8N967 370 aa13.27□□□□□ -0.29
GGPS1-206ENST00000488594 SHANK2-AS3Q9BTD1 123 aa13.27□□□□□ -0.29
GGPS1-206ENST00000488594 SYNGR2O43760 224 aa13.26□□□□□ -0.29
GGPS1-206ENST00000488594 HTN1P15515 57 aa13.26□□□□□ -0.29
GGPS1-206ENST00000488594 S100A7AQ86SG5 101 aa13.26□□□□□ -0.29
GGPS1-206ENST00000488594 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
GGPS1-206ENST00000488594 Q9H3A6 140 aa13.26□□□□□ -0.29
GGPS1-206ENST00000488594 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
GGPS1-206ENST00000488594 ADAP1O75689 374 aa13.25□□□□□ -0.29
GGPS1-206ENST00000488594 CXCL3P19876 107 aa13.25□□□□□ -0.29
GGPS1-206ENST00000488594 TMED4Q7Z7H5 227 aa13.25□□□□□ -0.29
GGPS1-206ENST00000488594 RNASE8Q8TDE3 154 aaKnown RBP13.25□□□□□ -0.29
GGPS1-206ENST00000488594 GNPNAT1Q96EK6 184 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-206ENST00000488594 NOP10Q9NPE3 64 aaKnown RBP13.25□□□□□ -0.29
GGPS1-206ENST00000488594 HIGD1AQ9Y241 93 aa13.25□□□□□ -0.29
GGPS1-206ENST00000488594 A0A087X0K7 114 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 WRBO00258 174 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 HYPMO75409 117 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 IL5P05113 134 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 SMIM18P0DKX4 95 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 M6PRP20645 277 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 FAUP35544 74 aaKnown RBP13.24□□□□□ -0.29
GGPS1-206ENST00000488594 CDKN1BP46527 198 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 SPCS2Q15005 226 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 SPANXN5Q5MJ07 72 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 ACOT7LQ6ZUV0 252 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 UPK3BQ9BT76 320 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
GGPS1-206ENST00000488594 H7BYZ3 331 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 VAMP1P23763 118 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 OR5I1Q13606 314 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 PSG3Q16557 428 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 CYP2G1PQ6ZSU1 146 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 LRRC20Q8TCA0 184 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 RXFP4Q8TDU9 374 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 KRTAP1-5Q9BYS1 174 aa13.23□□□□□ -0.29
GGPS1-206ENST00000488594 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
GGPS1-206ENST00000488594 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
GGPS1-206ENST00000488594 PLP1P60201 277 aa13.22□□□□□ -0.29
GGPS1-206ENST00000488594 SELENOTP62341 195 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms