RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 HYPMO75409 117 aa16.16■□□□□ 0.18
PTPN4-211ENST00000488279 HBE1P02100 147 aa16.16■□□□□ 0.18
PTPN4-211ENST00000488279 ANXA7P20073 488 aaKnown RBP16.16■□□□□ 0.18
PTPN4-211ENST00000488279 RAP2BP61225 183 aa16.16■□□□□ 0.18
PTPN4-211ENST00000488279 SLC25A39Q9BZJ4 359 aaPredicted RBP16.16■□□□□ 0.18
PTPN4-211ENST00000488279 DKK2Q9UBU2 259 aa16.16■□□□□ 0.18
PTPN4-211ENST00000488279 PMS2P5A8MQ11 134 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 P0DMU3 169 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 FAM231AP0DMU4 169 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 FAM231CP0DMU5 169 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 SELENOTP62341 195 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 FGL1Q08830 312 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 C1orf158Q8N1D5 194 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 SCRT1Q9BWW7 348 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 HIGD1AQ9Y241 93 aa16.15■□□□□ 0.18
PTPN4-211ENST00000488279 DUSP14O95147 198 aaKnown RBP16.14■□□□□ 0.17
PTPN4-211ENST00000488279 FAM222AQ5U5X8 452 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 S100A7AQ86SG5 101 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 SDHCQ99643 169 aaPredicted RBP16.14■□□□□ 0.17
PTPN4-211ENST00000488279 NIPSNAP3BQ9BS92 247 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 SHANK2-AS3Q9BTD1 123 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 TMEM208Q9BTX3 173 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 NPVFQ9HCQ7 196 aa16.14■□□□□ 0.17
PTPN4-211ENST00000488279 A8MTW9 85 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 H3BRN7 92 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 SCGB1D2O95969 90 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 OR5G3P0C626 314 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 LINC00869P0C866 280 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 RPL7P18124 248 aaKnown RBP16.13■□□□□ 0.17
PTPN4-211ENST00000488279 PLP1P60201 277 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 RRAS2P62070 204 aaPredicted RBP16.13■□□□□ 0.17
PTPN4-211ENST00000488279 DLK1P80370 383 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 RRN3P1Q2M238 152 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 IAH1Q2TAA2 248 aaPredicted RBP16.13■□□□□ 0.17
PTPN4-211ENST00000488279 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 IGFL4Q6B9Z1 124 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 TMEM14EPQ6UXP3 125 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 POM121L12Q8N7R1 296 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 OR10P1Q8NGE3 313 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 IGF2BP2-AS1Q96M15 143 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 GSKIPQ9P0R6 139 aa16.13■□□□□ 0.17
PTPN4-211ENST00000488279 TRAV8-2A0A0B4J237 113 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 LOC102723971A0A1B0GUV8 181 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 FNDC10F2Z333 226 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 METTL15P1P0C7V9 234 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 BTCP35070 178 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 CNN1P51911 297 aaKnown RBP16.12■□□□□ 0.17
PTPN4-211ENST00000488279 AMTNQ6UX39 209 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 FAM210BQ96KR6 192 aa16.12■□□□□ 0.17
PTPN4-211ENST00000488279 HECTD4Q9Y4D8 3996 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 IL7P13232 177 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 TAS2R30P59541 319 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 RNF182Q8N6D2 247 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 MITD1Q8WV92 249 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 PLA2G2EQ9NZK7 142 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 MGAT4CQ9UBM8 478 aa16.11■□□□□ 0.17
PTPN4-211ENST00000488279 YTHDF2Q9Y5A9 579 aaKnown RBP16.11■□□□□ 0.17
PTPN4-211ENST00000488279 TSC22D2O75157 780 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 CCNKO75909 580 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 OXA1LQ15070 435 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 TEPPQ6URK8 271 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 ZBTB8BQ8NAP8 495 aaPredicted RBP16.1■□□□□ 0.17
PTPN4-211ENST00000488279 ZNF738Q8NE65 137 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 UHRF2Q96PU4 802 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 ARL6Q9H0F7 186 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 RNF24Q9Y225 148 aa16.1■□□□□ 0.17
PTPN4-211ENST00000488279 SPINK13Q1W4C9 94 aa16.09■□□□□ 0.17
PTPN4-211ENST00000488279 OR11H7Q8NGC8 314 aa16.09■□□□□ 0.17
PTPN4-211ENST00000488279 K7EPK0 472 aa16.08■□□□□ 0.16
PTPN4-211ENST00000488279 INSP01308 110 aa16.08■□□□□ 0.16
PTPN4-211ENST00000488279 LRRC20Q8TCA0 184 aa16.08■□□□□ 0.16
PTPN4-211ENST00000488279 M0R2Z0 102 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 HTN3P15516 51 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 B2MP61769 119 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 SLC38A11Q08AI6 406 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 PXDC1Q5TGL8 231 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 GGACTQ9BVM4 153 aa16.07■□□□□ 0.16
PTPN4-211ENST00000488279 RCL1Q9Y2P8 373 aaKnown RBP16.07■□□□□ 0.16
PTPN4-211ENST00000488279 A0A087X0K7 114 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 C7orf66A4D0T2 115 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 GOSR2O14653 212 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 CRXO43186 299 aaPredicted RBP16.06■□□□□ 0.16
PTPN4-211ENST00000488279 MBPP02686 304 aaPredicted RBP16.06■□□□□ 0.16
PTPN4-211ENST00000488279 CXCL3P19876 107 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 DAD1P61803 113 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 PATE2Q6UY27 113 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 LINC00336Q6ZUF6 198 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 C20orf85Q9H1P6 137 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 ARV1Q9H2C2 271 aa16.06■□□□□ 0.16
PTPN4-211ENST00000488279 RHOBP62745 196 aa16.05■□□□□ 0.16
PTPN4-211ENST00000488279 ARL16Q0P5N6 197 aa16.05■□□□□ 0.16
PTPN4-211ENST00000488279 ZNF846Q147U1 533 aa16.05■□□□□ 0.16
PTPN4-211ENST00000488279 ZNF546Q86UE3 836 aa16.05■□□□□ 0.16
PTPN4-211ENST00000488279 PPP1R14DQ9NXH3 145 aa16.05■□□□□ 0.16
PTPN4-211ENST00000488279 ZNF705GA8MUZ8 300 aaPredicted RBP16.04■□□□□ 0.16
PTPN4-211ENST00000488279 BOLA2-SMG1P6H3BVE0 249 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 L7N2F9 121 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 AGPAT2O15120 278 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 PLA2G10O15496 165 aa16.04■□□□□ 0.16
PTPN4-211ENST00000488279 VAMP2P63027 116 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms