RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ATF4P18848 351 aaPredicted RBP17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 S100A11P31949 105 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 CAMLGP49069 296 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 MEOX2P50222 304 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 GDF5OSQ5U4N7 250 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 MORN3Q6PF18 240 aaPredicted RBP17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 PATE2Q6UY27 113 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 OR11H2Q8NH07 326 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 WDR83OSQ9Y284 106 aa17.31■□□□□ 0.36
RHBDD3-205ENST00000488106 DYNC2H1Q8NCM8 4307 aaKnown RBP17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 E5RGE8 158 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 COX7A2P2O60397 106 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 GIG44P09565 113 aaPredicted RBP17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 HLA-DRB4P13762 266 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 FGL1Q08830 312 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 RAB31Q13636 194 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 VWC2Q2TAL6 325 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 PPP1R1CQ8WVI7 109 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 C17orf77Q96MU5 243 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 RARRES2Q99969 163 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 ALG5Q9Y673 324 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 HLA-DRB4X5D2U9 266 aa17.3■□□□□ 0.36
RHBDD3-205ENST00000488106 H0YIZ8 118 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 H3BMM0 161 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 RPL7P18124 248 aaKnown RBP17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 EWSR1Q01844 656 aaKnown RBP eCLIP17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 PXDC1Q5TGL8 231 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 SAMD13Q5VXD3 122 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 MIC13Q5XKP0 118 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 S100A7AQ86SG5 101 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 IL17DQ8TAD2 202 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 CLEC5AQ9NY25 188 aa17.29■□□□□ 0.36
RHBDD3-205ENST00000488106 IGKV3-20P01619 116 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 FGF7P21781 194 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 NHLH2Q02577 135 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 LINC00305Q7Z4B0 112 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 C20orf173Q96LM9 149 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 SLC25A31Q9H0C2 315 aa17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 SAV1Q9H4B6 383 aaPredicted RBP17.28■□□□□ 0.36
RHBDD3-205ENST00000488106 FOXI2Q6ZQN5 318 aa17.27■□□□□ 0.36
RHBDD3-205ENST00000488106 OR5C1Q8NGR4 320 aa17.27■□□□□ 0.36
RHBDD3-205ENST00000488106 F6UB75 175 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 ATP6V1FQ16864 119 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 TMEM41BQ5BJD5 291 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 C10orf113Q5VZT2 155 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 IGFL4Q6B9Z1 124 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 RPRMQ9NS64 109 aa17.26■□□□□ 0.35
RHBDD3-205ENST00000488106 PRR20EP86478 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 PRR20CP86479 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 PRR20DP86480 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 PRR20BP86481 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 PRR20AP86496 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 PMS2P11Q13670 270 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 CLINT1Q14677 625 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 OPCMLQ14982 345 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 Q6ZRG5 221 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 RNF182Q8N6D2 247 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 OR4B1Q8NGF8 309 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 THAP6Q8TBB0 222 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 TMEM37Q8WXS4 190 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 XCL2Q9UBD3 114 aa17.25■□□□□ 0.35
RHBDD3-205ENST00000488106 RYR3Q15413 4870 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 MPC2O95563 127 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 PET100P0DJ07 73 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 NUTF2P61970 127 aaKnown RBP17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 MORN5Q5VZ52 161 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 EBLN2Q6P2I7 272 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 LYSTQ99698 3801 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 RNF24Q9Y225 148 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 PXMP4Q9Y6I8 212 aa17.24■□□□□ 0.35
RHBDD3-205ENST00000488106 ELOA3CA0A087WX78 387 aaPredicted RBP17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 TRAV8-2A0A0B4J237 113 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 DEFB4AO15263 64 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 FXYD7P58549 80 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 B2MP61769 119 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 RNF126Q9BV68 326 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 SLC39A9Q9NUM3 307 aa17.23■□□□□ 0.35
RHBDD3-205ENST00000488106 A0A087X0K7 114 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 CXorf65A6NEN9 183 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 SNRPCP09234 159 aaKnown RBP17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 CXCL3P19876 107 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 RPL29P47914 159 aaKnown RBP17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 FAM78BQ5VT40 261 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 OR1L4Q8NGR5 311 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 C1QTNF4Q9BXJ3 329 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 NPCDR1Q9BY65 106 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 DNAJC4Q9NNZ3 241 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 MBD2Q9UBB5 411 aa17.22■□□□□ 0.35
RHBDD3-205ENST00000488106 A0A0J9YX75 114 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 MRPS12O15235 138 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 MPDU1O75352 247 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 CSNK1G2-AS1Q8NCQ2 148 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 ZNF738Q8NE65 137 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 LRRC20Q8TCA0 184 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 PFDN5Q99471 154 aa17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 C11orf68Q9H3H3 251 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-205ENST00000488106 HLA-DMBP28068 263 aa17.2■□□□□ 0.34
RHBDD3-205ENST00000488106 SPATA31B1PQ5VZV4 182 aa17.2■□□□□ 0.34
RHBDD3-205ENST00000488106 BPIFA4PQ86YQ2 179 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms