RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 LYL1P12980 280 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 FGF7P21781 194 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 FGL1Q08830 312 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 IL15RAQ13261 267 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 C10orf113Q5VZT2 155 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 EBLN2Q6P2I7 272 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 OR5C1Q8NGR4 320 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 SHANK2-AS3Q9BTD1 123 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 RSG1Q9BU20 258 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 SLC25A32Q9H2D1 315 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 RETNQ9HD89 108 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 ALG5Q9Y673 324 aa6.92□□□□□ -1.3
LCN2-205ENST00000487719 MPC2O95563 127 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 IFNA5P01569 189 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 H2BFSP57053 126 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 B2MP61769 119 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 EWSR1Q01844 656 aaKnown RBP eCLIP6.91□□□□□ -1.3
LCN2-205ENST00000487719 ARL16Q0P5N6 197 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 ZNF124Q15973 351 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 VWC2Q2TAL6 325 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 LINC00305Q7Z4B0 112 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 BPIFA4PQ86YQ2 179 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 FAM24BQ8N5W8 94 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 RNF183Q96D59 192 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 MGST2Q99735 147 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 SCRT1Q9BWW7 348 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 WDR83OSQ9Y284 106 aa6.91□□□□□ -1.3
LCN2-205ENST00000487719 KNCNA6PVL3 124 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 RPL29P47914 159 aaKnown RBP6.9□□□□□ -1.3
LCN2-205ENST00000487719 CLINT1Q14677 625 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 LCN15Q6UWW0 184 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 TMEM182Q6ZP80 229 aaPredicted RBP6.9□□□□□ -1.3
LCN2-205ENST00000487719 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 TRPT1Q86TN4 253 aaKnown RBP6.9□□□□□ -1.3
LCN2-205ENST00000487719 SCGB1C1Q8TD33 95 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 UHRF2Q96PU4 802 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 RARRES2Q99969 163 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 C11orf1Q9H5F2 150 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 DNAJC4Q9NNZ3 241 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 MBD2Q9UBB5 411 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 PXMP4Q9Y6I8 212 aa6.9□□□□□ -1.3
LCN2-205ENST00000487719 DUSP14O95147 198 aaKnown RBP6.89□□□□□ -1.31
LCN2-205ENST00000487719 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 CXCL2P19875 107 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 RPL12P30050 165 aaKnown RBP6.89□□□□□ -1.31
LCN2-205ENST00000487719 NHLH2Q02577 135 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 OPCMLQ14982 345 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 OR4B1Q8NGF8 309 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 CHAC2Q8WUX2 184 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 ATP5SQ99766 215 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 SLC50A1Q9BRV3 221 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 NPCDR1Q9BY65 106 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 EDA2RQ9HAV5 297 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 SLC39A9Q9NUM3 307 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 PPP1R14DQ9NXH3 145 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
LCN2-205ENST00000487719 A0A087X0K7 114 aa6.88□□□□□ -1.31
LCN2-205ENST00000487719 GUK1Q16774 197 aa6.88□□□□□ -1.31
LCN2-205ENST00000487719 INO80EQ8NBZ0 244 aaPredicted RBP6.88□□□□□ -1.31
LCN2-205ENST00000487719 ZNF738Q8NE65 137 aa6.88□□□□□ -1.31
LCN2-205ENST00000487719 OR11H2Q8NH07 326 aa6.88□□□□□ -1.31
LCN2-205ENST00000487719 SAV1Q9H4B6 383 aaPredicted RBP6.88□□□□□ -1.31
LCN2-205ENST00000487719 HSPB11Q9Y547 144 aa6.88□□□□□ -1.31
LCN2-205ENST00000487719 HUWE1Q7Z6Z7 4374 aaKnown RBP6.87□□□□□ -1.31
LCN2-205ENST00000487719 H3BMM0 161 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 SOCS3O14543 225 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
LCN2-205ENST00000487719 PRR20EP86478 221 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 PRR20CP86479 221 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 PRR20DP86480 221 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 PRR20BP86481 221 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 PRR20AP86496 221 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 ZNF266Q14584 549 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.87□□□□□ -1.31
LCN2-205ENST00000487719 WDR61Q9GZS3 305 aaKnown RBP6.87□□□□□ -1.31
LCN2-205ENST00000487719 A0A0J9YWU9 116 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 H0YIZ8 118 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 AMBPP02760 352 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 MIFP14174 115 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 CXCL3P19876 107 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 PSG9Q00887 426 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 FCN2Q15485 313 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 TMEM37Q8WXS4 190 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 CLUHP3Q96NS8 147 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 MRPL32Q9BYC8 188 aaKnown RBP6.86□□□□□ -1.31
LCN2-205ENST00000487719 SMIM3Q9BZL3 60 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 C11orf68Q9H3H3 251 aaKnown RBP6.86□□□□□ -1.31
LCN2-205ENST00000487719 HRH4Q9H3N8 390 aa6.86□□□□□ -1.31
LCN2-205ENST00000487719 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms