RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PVALBP20472 110 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-209ENST00000487617 ARL6Q9H0F7 186 aa14.83□□□□□ -0.04
HDAC4-209ENST00000487617 GPN1Q9HCN4 374 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-209ENST00000487617 X6R8D5 127 aa14.83□□□□□ -0.04
HDAC4-209ENST00000487617 FAM24AA6NFZ4 105 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 GOSR2O14653 212 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 IFITM3Q01628 133 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 EBLN2Q6P2I7 272 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 S100A7AQ86SG5 101 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 ZNF546Q86UE3 836 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 OR4B1Q8NGF8 309 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 C20orf173Q96LM9 149 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 C17orf77Q96MU5 243 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 C11orf1Q9H5F2 150 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 RPRMQ9NS64 109 aa14.82□□□□□ -0.04
HDAC4-209ENST00000487617 F6UB75 175 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 AGPAT2O15120 278 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 CST7O76096 145 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 RBMY1A1P0DJD3 496 aaKnown RBP14.81□□□□□ -0.04
HDAC4-209ENST00000487617 RBMY1CP0DJD4 496 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 FXYD7P58549 80 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 FGL1Q08830 312 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 RAB32Q13637 225 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 RBMY1FQ15415 496 aaKnown RBP14.81□□□□□ -0.04
HDAC4-209ENST00000487617 SPATA31B1PQ5VZV4 182 aa14.81□□□□□ -0.04
HDAC4-209ENST00000487617 RPL7P18124 248 aaKnown RBP14.8□□□□□ -0.04
HDAC4-209ENST00000487617 IL15RAQ13261 267 aa14.8□□□□□ -0.04
HDAC4-209ENST00000487617 CLUHP3Q96NS8 147 aa14.8□□□□□ -0.04
HDAC4-209ENST00000487617 ARV1Q9H2C2 271 aa14.8□□□□□ -0.04
HDAC4-209ENST00000487617 A0A0J9YX75 114 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 PXDC1Q5TGL8 231 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 FAM78BQ5VT40 261 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 PATE2Q6UY27 113 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 NRARPQ7Z6K4 114 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 MGST2Q99735 147 aa14.79□□□□□ -0.04
HDAC4-209ENST00000487617 PSG9Q00887 426 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 RAB31Q13636 194 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 IGFL4Q6B9Z1 124 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 LINC00476Q8WZB0 136 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 BATF3Q9NR55 127 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 LYRM2Q9NU23 88 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-209ENST00000487617 RNF24Q9Y225 148 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 SACSQ9NZJ4 4579 aa14.78□□□□□ -0.04
HDAC4-209ENST00000487617 ELOA3CA0A087WX78 387 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-209ENST00000487617 TRAV8-2A0A0B4J237 113 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 IGSF23A1L1A6 192 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 INMT-MINDY4F8WBC2 141 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 COX7A2P2O60397 106 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 CAMLGP49069 296 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 SULT1A1P50225 295 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 RNF182Q8N6D2 247 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 TMEM252Q8N6L7 170 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF709Q8N972 641 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 SLC35B3Q9H1N7 401 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 HRH4Q9H3N8 390 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 UQCC1Q9NVA1 299 aa14.77□□□□□ -0.05
HDAC4-209ENST00000487617 PRAF2O60831 178 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 SIX6O95475 246 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 LY6G6CO95867 125 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 S100A11P31949 105 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 LINC00305Q7Z4B0 112 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 STX12Q86Y82 276 aa14.76□□□□□ -0.05
HDAC4-209ENST00000487617 RYR2Q92736 4967 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 IGHV3OR16-12A0A075B7B8 117 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 DEFA1P59665 94 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 DEFA3P59666 94 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 HBG1P69891 147 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 HBG2P69892 147 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 LRRC20Q8TCA0 184 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 WDR83OSQ9Y284 106 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 LYSTQ99698 3801 aa14.75□□□□□ -0.05
HDAC4-209ENST00000487617 A0A087X0K7 114 aa14.74□□□□□ -0.05
HDAC4-209ENST00000487617 UBE2L5PA0A1B0GUS4 154 aa14.74□□□□□ -0.05
HDAC4-209ENST00000487617 HLA-DMBP28068 263 aa14.74□□□□□ -0.05
HDAC4-209ENST00000487617 VWC2Q2TAL6 325 aa14.74□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF705AQ6ZN79 300 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF738Q8NE65 137 aa14.74□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF705FA8MVS1 300 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-209ENST00000487617 DUSP14O95147 198 aaKnown RBP14.73□□□□□ -0.05
HDAC4-209ENST00000487617 RLN2P04090 185 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF705DP0CH99 300 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-209ENST00000487617 ZNF705BP0CI00 300 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-209ENST00000487617 BAXQ07812 192 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 C10orf113Q5VZT2 155 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 MIC13Q5XKP0 118 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 Q6ZRG5 221 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 C2CD4CQ8TF44 421 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 TMEM37Q8WXS4 190 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 NEU1Q99519 415 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 MARVELD1Q9BSK0 173 aa14.73□□□□□ -0.05
HDAC4-209ENST00000487617 A8MTW9 85 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 C11orf94C9JXX5 98 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 MRPS12O15235 138 aaKnown RBP14.72□□□□□ -0.05
HDAC4-209ENST00000487617 CNN1P51911 297 aaKnown RBP14.72□□□□□ -0.05
HDAC4-209ENST00000487617 LRRC37A5PQ49AS3 106 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 BPIFA4PQ86YQ2 179 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 NMES1Q9C002 83 aa14.72□□□□□ -0.05
HDAC4-209ENST00000487617 DNAJC4Q9NNZ3 241 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms