RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TMEM200BQ69YZ2 307 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 TOMM40O96008 361 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 IGLV1-44P01699 117 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 OCIAD2Q56VL3 154 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 GAGE12BA1L429 117 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 IGHV3-23P01764 117 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 OR5AL1P0C617 328 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 GAL3ST2Q9H3Q3 398 aa9.91□□□□□ -0.82
HSPG2-211ENST00000486901 LHBP01229 141 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 IFI27P40305 119 aaPredicted RBP9.9□□□□□ -0.82
HSPG2-211ENST00000486901 NHLH1Q02575 133 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 PLGLAQ15195 96 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 COX19Q49B96 90 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 TMEM213A2RRL7 107 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 H3BUT2 72 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 TCRAP04437 139 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 TMEM11P17152 192 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 TNFRSF1AP19438 455 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 NMUP48645 174 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 ZADH2Q8N4Q0 377 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 MEGF9Q9H1U4 602 aa9.9□□□□□ -0.82
HSPG2-211ENST00000486901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.9□□□□□ -0.83
HSPG2-211ENST00000486901 C7orf71A4D174 169 aa9.9□□□□□ -0.83
HSPG2-211ENST00000486901 ZNF714Q96N38 554 aa9.9□□□□□ -0.83
HSPG2-211ENST00000486901 MRPL32Q9BYC8 188 aaKnown RBP9.9□□□□□ -0.83
HSPG2-211ENST00000486901 FBXL15Q9H469 300 aa9.9□□□□□ -0.83
HSPG2-211ENST00000486901 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 K7EM74 188 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 SAPCD1Q5SSQ6 148 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 PNKDQ8N490 385 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 C7orf69Q9H7B7 122 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 MZT1Q08AG7 82 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 ZNF788Q6ZQV5 615 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 PERPQ96FX8 193 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 THYN1Q9P016 225 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 LRRK2Q5S007 2527 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 GPR183P32249 361 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 GLRXP35754 106 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 GUSBP1Q15486 140 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
HSPG2-211ENST00000486901 TMEM265A0A087WTH1 108 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 PPIFP30405 207 aaKnown RBP9.88□□□□□ -0.83
HSPG2-211ENST00000486901 CDKN1BP46527 198 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
HSPG2-211ENST00000486901 OR4C13Q8NGP0 309 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 C8orf49Q96NF6 230 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 EPG5Q9HCE0 2579 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 C2CD3Q4AC94 2353 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 AP5S1Q9NUS5 200 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 TRAV30A0A087WSZ9 112 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 CACNG7P62955 275 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-211ENST00000486901 BPIFA4PQ86YQ2 179 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
HSPG2-211ENST00000486901 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 FSTL3O95633 263 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 HLA-DRB1P01911 266 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 FNDC10F2Z333 226 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 OR2J3O76001 311 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 SUB1P53999 127 aaKnown RBP eCLIP9.87□□□□□ -0.833e-6■■■■□ 20
HSPG2-211ENST00000486901 CR1LQ2VPA4 569 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 TMEM75Q8N9X5 138 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 OSR1Q8TAX0 266 aaPredicted RBP9.87□□□□□ -0.83
HSPG2-211ENST00000486901 CACNG8Q8WXS5 425 aa9.87□□□□□ -0.83
HSPG2-211ENST00000486901 TRAV17A0A0B4J275 112 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 FAM231DQ6ZW35 169 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 Q8TAT8 98 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 WIPF2Q8TF74 440 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-211ENST00000486901 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 D6R8Y8 96 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 CNIH1O95406 144 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 C5orf17Q8NAS9 161 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-211ENST00000486901 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 DYNLRB1Q9NP97 96 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 LY6HO94772 140 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 DEFB125Q8N687 156 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 NEU4Q8WWR8 484 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-211ENST00000486901 C19orf24Q9BVV8 132 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 TMEM133Q9H2Q1 129 aa9.86□□□□□ -0.83
HSPG2-211ENST00000486901 LIPFP07098 398 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 RPL27AP46776 148 aaKnown RBP9.85□□□□□ -0.83
HSPG2-211ENST00000486901 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 PRSS33Q8NF86 280 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 VSTM2AQ8TAG5 236 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 ITGB1BP1O14713 200 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 GAS8-AS1O95177 125 aa9.85□□□□□ -0.83
HSPG2-211ENST00000486901 IGHG3P01860 377 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms