RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 A0A0J9YX75 114 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 FAM25EA8MYX2 175 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 K7EPK0 472 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 H2AFB2P0C5Z0 115 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 LINC00869P0C866 280 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 HLA-DMBP28068 263 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 LGALS9CQ6DKI2 356 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 TEPPQ6URK8 271 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 ZNF705AQ6ZN79 300 aaPredicted RBP13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 C20orf173Q96LM9 149 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 NEU1Q99519 415 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 GGACTQ9BVM4 153 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 SCRT1Q9BWW7 348 aa13.28□□□□□ -0.28
PRPF40A-209ENST00000486100 FAM240BA0A1B0GVZ2 78 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 F6UB75 175 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 L7N2F9 121 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 DEDDO75618 318 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 OR5G3P0C626 314 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 TCTAP57738 103 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 FXYD7P58549 80 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 VAMP2P63027 116 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 PSG9Q00887 426 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 FAM78BQ5VT40 261 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 S100A7AQ86SG5 101 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 ZNF709Q8N972 641 aa13.27□□□□□ -0.29
PRPF40A-209ENST00000486100 C5orf51A6NDU8 294 aa13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 RPL7P18124 248 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 MZT2BQ6NZ67 158 aa13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 C2orf50Q96LR7 162 aa13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 ARL6Q9H0F7 186 aa13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 LSM5Q9Y4Y9 91 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-209ENST00000486100 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 FGL1Q08830 312 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 SLC38A11Q08AI6 406 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 PXDC1Q5TGL8 231 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 Q6ZTC4 211 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
PRPF40A-209ENST00000486100 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 A8MTW9 85 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 IGLL5B9A064 214 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 GOSR2O14653 212 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 AGPAT2O15120 278 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 BCAP31P51572 246 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 ASAH1Q13510 395 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 C11orf1Q9H5F2 150 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 CELA1Q9UNI1 258 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 BIRC6Q9NR09 4857 aa13.24□□□□□ -0.29
PRPF40A-209ENST00000486100 IGHV3OR16-12A0A075B7B8 117 aa13.23□□□□□ -0.29
PRPF40A-209ENST00000486100 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
PRPF40A-209ENST00000486100 ZNF546Q86UE3 836 aa13.23□□□□□ -0.29
PRPF40A-209ENST00000486100 ARV1Q9H2C2 271 aa13.23□□□□□ -0.29
PRPF40A-209ENST00000486100 APLNQ9ULZ1 77 aa13.23□□□□□ -0.29
PRPF40A-209ENST00000486100 A0A087X0K7 114 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 FAM24AA6NFZ4 105 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 UPK1BO75841 260 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 DUSP14O95147 198 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 PVALBP20472 110 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 CAV2P51636 162 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 IL15RAQ13261 267 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 AMTNQ6UX39 209 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 GOLT1BQ9Y3E0 138 aa13.22□□□□□ -0.29
PRPF40A-209ENST00000486100 C1orf158Q8N1D5 194 aa13.21□□□□□ -0.29
PRPF40A-209ENST00000486100 RNF182Q8N6D2 247 aa13.21□□□□□ -0.29
PRPF40A-209ENST00000486100 MGST2Q99735 147 aa13.21□□□□□ -0.29
PRPF40A-209ENST00000486100 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
PRPF40A-209ENST00000486100 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 CST7O76096 145 aa13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 SPART-AS1P0CW21 52 aa13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 CNN1P51911 297 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 RAB31Q13636 194 aa13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 ZNF767PQ75MW2 155 aa13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-209ENST00000486100 DEFB131BA0A096LNP1 70 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 AMBPP02760 352 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 CXCL3P19876 107 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 CAMLGP49069 296 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 EMP1P54849 157 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 DEFA1P59665 94 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 DEFA3P59666 94 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 S100A10P60903 97 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 RAB32Q13637 225 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 TMEM37Q8WXS4 190 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 RNF126Q9BV68 326 aa13.19□□□□□ -0.3
PRPF40A-209ENST00000486100 LYRM2Q9NU23 88 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms