RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TFPI2P48307 235 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 TAS2R45P59539 299 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 SERF2P84101 59 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 ZNF345Q14585 488 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 OPCMLQ14982 345 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 GUK1Q16774 197 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 ACOT6Q3I5F7 207 aaPredicted RBP6.21□□□□□ -1.42
SF3A1-208ENST00000485618 WFDC3Q8IUB2 231 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 TCTE3Q8IZS6 198 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 HYLS1Q96M11 299 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 RSG1Q9BU20 258 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 TIMM9Q9Y5J7 89 aa6.21□□□□□ -1.42
SF3A1-208ENST00000485618 A0A1W2PPV4 95 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 A8MZ25 164 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 K7EIL1 84 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 ISLRO14498 428 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 NHLRC4P0CG21 123 aaPredicted RBP6.2□□□□□ -1.42
SF3A1-208ENST00000485618 RHOBP62745 196 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 Q5BKY6 102 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 FFAR4Q5NUL3 377 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 EIF5AL1Q6IS14 154 aaKnown RBP6.2□□□□□ -1.42
SF3A1-208ENST00000485618 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
SF3A1-208ENST00000485618 ZNF414Q96IQ9 312 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 ARPC5LQ9BPX5 153 aa6.2□□□□□ -1.42
SF3A1-208ENST00000485618 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
SF3A1-208ENST00000485618 hCG_2014768A0A024R1R8 64 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 H3BRN7 92 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 K7EQG2 157 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 CXCL2P19875 107 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 M6PRP20645 277 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 EDN2P20800 178 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 PSMB3P49720 205 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 APOC4P55056 127 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 SPATA31B1PQ5VZV4 182 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 KCNRGQ8N5I3 272 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 C16orf92Q96LL3 132 aa6.19□□□□□ -1.42
SF3A1-208ENST00000485618 PSMG3Q9BT73 122 aaPredicted RBP6.19□□□□□ -1.42
SF3A1-208ENST00000485618 LOC102724200A0A096LPH7 203 aaPredicted RBP6.18□□□□□ -1.42
SF3A1-208ENST00000485618 UBE2CO00762 179 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 C1QBP02746 253 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 CD7P09564 240 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 IGHV4-30-4P0DP06 118 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 NUTF2P61970 127 aaKnown RBP6.18□□□□□ -1.42
SF3A1-208ENST00000485618 PSG9Q00887 426 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 ZFP69Q49AA0 526 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 FAM78BQ5VT40 261 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 EBLN2Q6P2I7 272 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 LCN15Q6UWW0 184 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 PATE2Q6UY27 113 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 STHQ8IWL8 128 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 Q8N1Y9 231 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 HSD17B11Q8NBQ5 300 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 OR2G3Q8NGZ4 309 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 TMEM37Q8WXS4 190 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 UHRF2Q96PU4 802 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 B9D2Q9BPU9 175 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 SCRT1Q9BWW7 348 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 SLC25A32Q9H2D1 315 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 SRD5A3Q9H8P0 318 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 RPRMQ9NS64 109 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 TMEM14CQ9P0S9 112 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 SELENOKQ9Y6D0 94 aa6.18□□□□□ -1.42
SF3A1-208ENST00000485618 A0A087X0K7 114 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 RNF222A6NCQ9 220 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 SMLR1H3BR10 107 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
SF3A1-208ENST00000485618 DEFB131AP59861 70 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 KHDC3LQ587J8 217 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 TMEM41BQ5BJD5 291 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 PSMG4Q5JS54 123 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 AKR1C8PQ5T2L2 129 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 LEMD1Q68G75 181 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 DEFB125Q8N687 156 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 OR10G4Q8NGN3 311 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 OR10G9Q8NGN4 311 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 OR10G7Q8NGN6 311 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 DCANP1Q8TF63 244 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 ST6GAL2Q96JF0 529 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
SF3A1-208ENST00000485618 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 AAMDCQ9H7C9 122 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 WFDC1Q9HC57 220 aa6.17□□□□□ -1.42
SF3A1-208ENST00000485618 KIR2DL5BA0A0G2JN68 375 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 KIR2DL5BA0A0G2JPC4 375 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 UMAD1C9J7I0 102 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 BCL2L11O43521 198 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 OR7C2O60412 319 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 ZNF253O75346 499 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 DUSP14O95147 198 aaKnown RBP6.16□□□□□ -1.42
SF3A1-208ENST00000485618 FRMD6-AS1P0C7T7 363 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 SPP1P10451 314 aa6.16□□□□□ -1.42
SF3A1-208ENST00000485618 TPT1P13693 172 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms