RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 Q6ZR54 194 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 S100A7AQ86SG5 101 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 OR1S2Q8NGQ3 325 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 LSM5Q9Y4Y9 91 aaKnown RBP9.33□□□□□ -0.92
HDAC6-227ENST00000485102 ABCA13Q86UQ4 5058 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 H3BMM0 161 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 IAPPP10997 89 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 S100A11P31949 105 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
HDAC6-227ENST00000485102 IL15RAQ13261 267 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 ATP6V1FQ16864 119 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 TIGITQ495A1 244 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 Q8WTZ3 238 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 PPP1R1CQ8WVI7 109 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 MAGT1Q9H0U3 335 aa9.32□□□□□ -0.92
HDAC6-227ENST00000485102 LYRM2Q9NU23 88 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-227ENST00000485102 PAIP2BQ9ULR5 123 aaKnown RBP9.32□□□□□ -0.92
HDAC6-227ENST00000485102 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 ZNF705FA8MVS1 300 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-227ENST00000485102 BUB3O43684 328 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 NXPH3O95157 252 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC6-227ENST00000485102 ZNF705DP0CH99 300 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-227ENST00000485102 ZNF705BP0CI00 300 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-227ENST00000485102 CAV2P51636 162 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 H2BFSP57053 126 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 RAB31Q13636 194 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 RAB32Q13637 225 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 PRSS54Q6PEW0 395 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 TMEM14EPQ6UXP3 125 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 NRN1Q9NPD7 142 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
HDAC6-227ENST00000485102 RCL1Q9Y2P8 373 aaKnown RBP9.31□□□□□ -0.92
HDAC6-227ENST00000485102 MPC2O95563 127 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 HLA-DRB4P13762 266 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 SULT1A1P50225 295 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 FCN2Q15485 313 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 RNF212Q495C1 297 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 Q6ZNX1 250 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 SCRT1Q9BWW7 348 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 XCL2Q9UBD3 114 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 HLA-DRB4X5D2U9 266 aa9.3□□□□□ -0.92
HDAC6-227ENST00000485102 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
HDAC6-227ENST00000485102 M0R2N4 97 aa9.29□□□□□ -0.92
HDAC6-227ENST00000485102 DLK1P80370 383 aa9.29□□□□□ -0.92
HDAC6-227ENST00000485102 INO80EQ8NBZ0 244 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-227ENST00000485102 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
HDAC6-227ENST00000485102 MPDU1O75352 247 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 SIX6O95475 246 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 OR10J1P30954 320 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 RND2P52198 227 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 SELENOTP62341 195 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 USF2Q15853 346 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-227ENST00000485102 LRRC37A5PQ49AS3 106 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 SIGLEC15Q6ZMC9 328 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 OR11H7Q8NGC8 314 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 KCNIP2Q9NS61 270 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 HSPG2P98160 4391 aa9.28□□□□□ -0.92
HDAC6-227ENST00000485102 NACAE9PAV3 2078 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 TOMM40O96008 361 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 CXCL3P19876 107 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 AKR1C1Q04828 323 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 SOHLH1Q5JUK2 328 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 OR8G2PQ6IF36 304 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 TMEM144Q7Z5S9 345 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 TMEM252Q8N6L7 170 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 CHAC2Q8WUX2 184 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 DKK2Q9UBU2 259 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 RFNGQ9Y644 331 aa9.27□□□□□ -0.93
HDAC6-227ENST00000485102 ZFP92A6NM28 416 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 H3BP45 60 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 IL4P05112 153 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 METTL15P1P0C7V9 234 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 RD3LP0DJH9 198 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 PAX9P55771 341 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 SPATA31B1PQ5VZV4 182 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 TEPPQ6URK8 271 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 TMEM170AQ8WVE7 144 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 TRGV9Q99603 122 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 NIPSNAP3BQ9BS92 247 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 TMEM147Q9BVK8 224 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 UQCC1Q9NVA1 299 aa9.26□□□□□ -0.93
HDAC6-227ENST00000485102 PSG1P11464 419 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 RPL12P30050 165 aaKnown RBP9.25□□□□□ -0.93
HDAC6-227ENST00000485102 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-227ENST00000485102 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 GAMTQ14353 236 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 ZNF266Q14584 549 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 NPIPB3Q92617 1050 aa9.25□□□□□ -0.93
HDAC6-227ENST00000485102 ACY3Q96HD9 319 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms