RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 APRG1Q8IVJ8 170 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 OR1L4Q8NGR5 311 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 PFDN5Q99471 154 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 ATP5SQ99766 215 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
COL2A1-206ENST00000483376 WDR61Q9GZS3 305 aaKnown RBP12.02□□□□□ -0.49
COL2A1-206ENST00000483376 KCNIP2Q9NS61 270 aa12.02□□□□□ -0.49
COL2A1-206ENST00000483376 ISLRO14498 428 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 OR5G3P0C626 314 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 B2MP61769 119 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 Q6ZWC4 215 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 RCHY1Q96PM5 261 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 DNAJC4Q9NNZ3 241 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 DOK5Q9P104 306 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
COL2A1-206ENST00000483376 TENM3Q9P273 2699 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 A0A087X0K7 114 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 COX7A2P2O60397 106 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 ID1P41134 155 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 CLINT1Q14677 625 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 MIC13Q5XKP0 118 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 LINC00305Q7Z4B0 112 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 GATAD1Q8WUU5 269 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 C17orf77Q96MU5 243 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 UHRF2Q96PU4 802 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 SLC25A22Q9H936 323 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 NBEAL2Q6ZNJ1 2754 aa12□□□□□ -0.49
COL2A1-206ENST00000483376 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
COL2A1-206ENST00000483376 ZNF124Q15973 351 aa11.99□□□□□ -0.49
COL2A1-206ENST00000483376 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
COL2A1-206ENST00000483376 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.99□□□□□ -0.49
COL2A1-206ENST00000483376 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
COL2A1-206ENST00000483376 CXCL2P19875 107 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 PSMG4Q5JS54 123 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 LEMD1Q68G75 181 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 TRPT1Q86TN4 253 aaKnown RBP11.98□□□□□ -0.49
COL2A1-206ENST00000483376 CLUHP3Q96NS8 147 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 RSG1Q9BU20 258 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 CSTL1Q9H114 145 aa11.98□□□□□ -0.49
COL2A1-206ENST00000483376 C17orf112F2Z3M2 114 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 TMEM41BQ5BJD5 291 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 SPATA31B1PQ5VZV4 182 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 STHQ8IWL8 128 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 ZNF709Q8N972 641 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 WWC2-AS2Q96NR7 200 aa11.97□□□□□ -0.49
COL2A1-206ENST00000483376 G3V3Q6 166 aa11.96□□□□□ -0.49
COL2A1-206ENST00000483376 IFNA5P01569 189 aa11.96□□□□□ -0.49
COL2A1-206ENST00000483376 SPP1P10451 314 aa11.96□□□□□ -0.49
COL2A1-206ENST00000483376 ATF4P18848 351 aaPredicted RBP11.96□□□□□ -0.49
COL2A1-206ENST00000483376 Q5BKY6 102 aa11.96□□□□□ -0.49
COL2A1-206ENST00000483376 MORN3Q6PF18 240 aaPredicted RBP11.96□□□□□ -0.49
COL2A1-206ENST00000483376 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
COL2A1-206ENST00000483376 HLA-DRB4P13762 266 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 RPL35AP18077 110 aaKnown RBP11.95□□□□□ -0.5
COL2A1-206ENST00000483376 ZNF266Q14584 549 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 C16orf92Q96LL3 132 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 TNFSF18Q9UNG2 199 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 HLA-DRB4X5D2U9 266 aa11.95□□□□□ -0.5
COL2A1-206ENST00000483376 H3BMM0 161 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 IGLC2P0DOY2 106 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 GUK1Q16774 197 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 ACTL10Q5JWF8 245 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 MORN5Q5VZ52 161 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 LCN15Q6UWW0 184 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-206ENST00000483376 SCGB1C1Q8TD33 95 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 RNF183Q96D59 192 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
COL2A1-206ENST00000483376 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 RPRMQ9NS64 109 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 CLEC5AQ9NY25 188 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 TMEM14CQ9P0S9 112 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
COL2A1-206ENST00000483376 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 RNF222A6NCQ9 220 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 KNCNA6PVL3 124 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 A8MTW9 85 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 ZNF253O75346 499 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 SLC50A1Q9BRV3 221 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 MRPL32Q9BYC8 188 aaKnown RBP11.93□□□□□ -0.5
COL2A1-206ENST00000483376 SMIM3Q9BZL3 60 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
COL2A1-206ENST00000483376 SPRY2O43597 315 aa11.92□□□□□ -0.5
COL2A1-206ENST00000483376 GIG44P09565 113 aaPredicted RBP11.92□□□□□ -0.5
COL2A1-206ENST00000483376 NUTF2P61970 127 aaKnown RBP11.92□□□□□ -0.5
COL2A1-206ENST00000483376 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
COL2A1-206ENST00000483376 RETNQ9HD89 108 aa11.92□□□□□ -0.5
COL2A1-206ENST00000483376 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
COL2A1-206ENST00000483376 A0A0J9YX75 114 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms