RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 MITD1Q8WV92 249 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 SMIM8Q96KF7 97 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 SEC22CQ9BRL7 303 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 SLC25A39Q9BZJ4 359 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 RPRMQ9NS64 109 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 NUDT15Q9NV35 164 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 MGAT4CQ9UBM8 478 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 HIGD1AQ9Y241 93 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 LSM5Q9Y4Y9 91 aaKnown RBP7.53□□□□□ -1.2
CPSF4-212ENST00000482251 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
CPSF4-212ENST00000482251 A0A0J9YX75 114 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 ZNF705FA8MVS1 300 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-212ENST00000482251 MBPP02686 304 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-212ENST00000482251 SNRPCP09234 159 aaKnown RBP7.52□□□□□ -1.21
CPSF4-212ENST00000482251 MEOX2P50222 304 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 DLK1P80370 383 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 PSG9Q00887 426 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 OR10P1Q8NGE3 313 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 SLC45A2Q9UMX9 530 aa7.52□□□□□ -1.21
CPSF4-212ENST00000482251 DEFB131BA0A096LNP1 70 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 TRAV8-2A0A0B4J237 113 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 C7orf66A4D0T2 115 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 M0R2Z0 102 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 TSC22D2O75157 780 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 HYPMO75409 117 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 TCRBP04435 133 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 CNN1P51911 297 aaKnown RBP7.51□□□□□ -1.21
CPSF4-212ENST00000482251 ZNF846Q147U1 533 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 SPINK13Q1W4C9 94 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 SAMD13Q5VXD3 122 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 ZNF738Q8NE65 137 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 ARL6Q9H0F7 186 aa7.51□□□□□ -1.21
CPSF4-212ENST00000482251 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 C5orf51A6NDU8 294 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 K7EPK0 472 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 L7N2F9 121 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 PRM2P04554 102 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 HTN3P15516 51 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 BCAP31P51572 246 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 CAV2P51636 162 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 S100A10P60903 97 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 VAMP2P63027 116 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 TEPPQ6URK8 271 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 BAP18Q8IXM2 172 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 C1orf158Q8N1D5 194 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
CPSF4-212ENST00000482251 GPR82Q96P67 336 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 TMEM208Q9BTX3 173 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 ARV1Q9H2C2 271 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 GOLT1BQ9Y3E0 138 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
CPSF4-212ENST00000482251 TRAV12-2A0A075B6T6 113 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 H3BTX0 84 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 GOSR2O14653 212 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 AGPAT2O15120 278 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 CST7O76096 145 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 HBE1P02100 147 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 AMBPP02760 352 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 RPL7P18124 248 aaKnown RBP7.49□□□□□ -1.21
CPSF4-212ENST00000482251 S100A7P31151 101 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 TCTAP57738 103 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 TAS2R30P59541 319 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 SELENOTP62341 195 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
CPSF4-212ENST00000482251 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 PATE2Q6UY27 113 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 ZNF546Q86UE3 836 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 OR11H7Q8NGC8 314 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 NEU1Q99519 415 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 MGST2Q99735 147 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 CCDC32Q9BV29 185 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 NPVFQ9HCQ7 196 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 NDUFA13Q9P0J0 144 aa7.49□□□□□ -1.21
CPSF4-212ENST00000482251 YTHDF2Q9Y5A9 579 aaKnown RBP7.49□□□□□ -1.21
CPSF4-212ENST00000482251 UBE2L5PA0A1B0GUS4 154 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 TMEM189A5PLL7 270 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 FAM24AA6NFZ4 105 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 COX7A2P2O60397 106 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 INSP01308 110 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 H2AFB2P0C5Z0 115 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 SPART-AS1P0CW21 52 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 PLP1P60201 277 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 CNPY1Q3B7I2 92 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 MORN5Q5VZ52 161 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 LINC00305Q7Z4B0 112 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 C12orf45Q8N5I9 185 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-212ENST00000482251 LRRC20Q8TCA0 184 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 RNF126Q9BV68 326 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
CPSF4-212ENST00000482251 A0A087X0K7 114 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms