RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 PXDC1Q5TGL8 231 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 GDF5OSQ5U4N7 250 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 STX12Q86Y82 276 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 TMEM252Q8N6L7 170 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 MGST2Q99735 147 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 C11orf68Q9H3H3 251 aaKnown RBP13.64□□□□□ -0.23
HSPG2-210ENST00000481644 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
HSPG2-210ENST00000481644 LCE6AA0A183 80 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
HSPG2-210ENST00000481644 RAB31Q13636 194 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 PATE2Q6UY27 113 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 ARV1Q9H2C2 271 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
HSPG2-210ENST00000481644 IGKV3-20P01619 116 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 S100A11P31949 105 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 CAMLGP49069 296 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 HBG1P69891 147 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 HBG2P69892 147 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 FGL1Q08830 312 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 EBLN2Q6P2I7 272 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 C20orf173Q96LM9 149 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 NMES1Q9C002 83 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 XCL2Q9UBD3 114 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 RNF24Q9Y225 148 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 WDR83OSQ9Y284 106 aa13.62□□□□□ -0.23
HSPG2-210ENST00000481644 UBE2L5PA0A1B0GUS4 154 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 DEFB4AO15263 64 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 RLN2P04090 185 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 CYCSP99999 105 aaKnown RBP13.61□□□□□ -0.23
HSPG2-210ENST00000481644 VWC2Q2TAL6 325 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 LRRC37A5PQ49AS3 106 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 SPATA31B1PQ5VZV4 182 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
HSPG2-210ENST00000481644 NUPR2A6NF83 97 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 ZNF705EA8MWA4 302 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-210ENST00000481644 F6UB75 175 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 SSNA1O43805 119 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 MIFP14174 115 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 BAXQ07812 192 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 LINC00305Q7Z4B0 112 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 Q8NAQ8 132 aa13.6□□□□□ -0.23
HSPG2-210ENST00000481644 A0A0J9YX75 114 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 E5RGE8 158 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 JTBO76095 146 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 FXYD7P58549 80 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 ATP6V1FQ16864 119 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 IGFL4Q6B9Z1 124 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 C11orf45Q8TAV5 145 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 X6R8D5 127 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 TENM2Q9NT68 2774 aa13.59□□□□□ -0.23
HSPG2-210ENST00000481644 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-210ENST00000481644 A0A087X0K7 114 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 TRAV8-2A0A0B4J237 113 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 IGHV4-28A0A0C4DH34 117 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 H2BFSP57053 126 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 FAM78BQ5VT40 261 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 C10orf113Q5VZT2 155 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 MIC13Q5XKP0 118 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-210ENST00000481644 Q6ZRG5 221 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 RNF182Q8N6D2 247 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 TMEM37Q8WXS4 190 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 MFFQ9GZY8 342 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 SLC25A31Q9H0C2 315 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 OR5AC2Q9NZP5 309 aa13.58□□□□□ -0.24
HSPG2-210ENST00000481644 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
HSPG2-210ENST00000481644 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 FGF7P21781 194 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 NANOS2P60321 138 aaKnown RBP13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PRR20EP86478 221 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PRR20CP86479 221 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PRR20DP86480 221 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PRR20BP86481 221 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PRR20AP86496 221 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 PSG9Q00887 426 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 NHLH2Q02577 135 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
HSPG2-210ENST00000481644 LRRC20Q8TCA0 184 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 RYR3Q15413 4870 aa13.57□□□□□ -0.24
HSPG2-210ENST00000481644 DYNC2H1Q8NCM8 4307 aaKnown RBP13.56□□□□□ -0.24
HSPG2-210ENST00000481644 H0YIZ8 118 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 MRPS12O15235 138 aaKnown RBP13.56□□□□□ -0.24
HSPG2-210ENST00000481644 B2MP61769 119 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 OPCMLQ14982 345 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 BPIFA4PQ86YQ2 179 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 ZNF709Q8N972 641 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 PHLDA1Q8WV24 401 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-210ENST00000481644 PPP1R1CQ8WVI7 109 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 SLC35B3Q9H1N7 401 aa13.56□□□□□ -0.24
HSPG2-210ENST00000481644 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms