RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 BTCP35070 178 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 FGL1Q08830 312 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 FAM222AQ5U5X8 452 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
CLK1-211ENST00000481641 DKK2Q9UBU2 259 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 GOLT1BQ9Y3E0 138 aa13.24□□□□□ -0.29
CLK1-211ENST00000481641 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 H3BRN7 92 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 ZNF701M0R085 212 aaPredicted RBP13.23□□□□□ -0.29
CLK1-211ENST00000481641 SCGB1D2O95969 90 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 IFNA21P01568 189 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 PRM2P04554 102 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 METTL15P1P0C7V9 234 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 PRB4P10163 310 aaPredicted RBP13.23□□□□□ -0.29
CLK1-211ENST00000481641 C4orf46Q504U0 113 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 AMTNQ6UX39 209 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 SMIM8Q96KF7 97 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 DNAH2Q9P225 4427 aa13.23□□□□□ -0.29
CLK1-211ENST00000481641 LOC102723971A0A1B0GUV8 181 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 A8MTW9 85 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 HBE1P02100 147 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 UHRF2Q96PU4 802 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 SHANK2-AS3Q9BTD1 123 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
CLK1-211ENST00000481641 M0R2Z0 102 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 OR5G3P0C626 314 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 LINC00869P0C866 280 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 HTN3P15516 51 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 CNN1P51911 297 aaKnown RBP13.21□□□□□ -0.29
CLK1-211ENST00000481641 IAH1Q2TAA2 248 aaPredicted RBP13.21□□□□□ -0.29
CLK1-211ENST00000481641 TMEM14EPQ6UXP3 125 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 GPR82Q96P67 336 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 NIPSNAP3BQ9BS92 247 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 GSKIPQ9P0R6 139 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.29
CLK1-211ENST00000481641 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
CLK1-211ENST00000481641 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 M0R2N4 97 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 HYPMO75409 117 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 RAP2BP61225 183 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 DLK1P80370 383 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 SPINK13Q1W4C9 94 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 RRN3P1Q2M238 152 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 ZBTB8BQ8NAP8 495 aaPredicted RBP13.2□□□□□ -0.3
CLK1-211ENST00000481641 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 IGF2BP2-AS1Q96M15 143 aa13.2□□□□□ -0.3
CLK1-211ENST00000481641 HERC2O95714 4834 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 CENPXA8MT69 81 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
CLK1-211ENST00000481641 P0DMU3 169 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 IL7P13232 177 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 S100A7P31151 101 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 PLP1P60201 277 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 SLC38A11Q08AI6 406 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 TMEM208Q9BTX3 173 aa13.19□□□□□ -0.3
CLK1-211ENST00000481641 RCL1Q9Y2P8 373 aaKnown RBP13.19□□□□□ -0.3
CLK1-211ENST00000481641 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
CLK1-211ENST00000481641 CCSO14618 274 aa13.18□□□□□ -0.3
CLK1-211ENST00000481641 DUSP14O95147 198 aaKnown RBP13.18□□□□□ -0.3
CLK1-211ENST00000481641 BAP18Q8IXM2 172 aa13.18□□□□□ -0.3
CLK1-211ENST00000481641 OR10P1Q8NGE3 313 aa13.18□□□□□ -0.3
CLK1-211ENST00000481641 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
CLK1-211ENST00000481641 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
CLK1-211ENST00000481641 TRAV12-2A0A075B6T6 113 aa13.17□□□□□ -0.3
CLK1-211ENST00000481641 PLA2G10O15496 165 aa13.17□□□□□ -0.3
CLK1-211ENST00000481641 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
CLK1-211ENST00000481641 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
CLK1-211ENST00000481641 SELENOTP62341 195 aa13.17□□□□□ -0.3
CLK1-211ENST00000481641 MITD1Q8WV92 249 aa13.17□□□□□ -0.3
CLK1-211ENST00000481641 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CLK1-211ENST00000481641 MBPP02686 304 aaPredicted RBP13.16□□□□□ -0.3
CLK1-211ENST00000481641 DAD1P61803 113 aa13.16□□□□□ -0.3
CLK1-211ENST00000481641 HIST1H1AQ02539 215 aaPredicted RBP13.16□□□□□ -0.3
CLK1-211ENST00000481641 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
CLK1-211ENST00000481641 MGAT4CQ9UBM8 478 aa13.16□□□□□ -0.3
CLK1-211ENST00000481641 C7orf66A4D0T2 115 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
CLK1-211ENST00000481641 TSC22D2O75157 780 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 INSP01308 110 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 CXCL3P19876 107 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 TAS2R30P59541 319 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 OXA1LQ15070 435 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 TEPPQ6URK8 271 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
CLK1-211ENST00000481641 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 A0A087X0K7 114 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 AZU1P20160 251 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 RHOBP62745 196 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 PSG3Q16557 428 aa13.14□□□□□ -0.31
CLK1-211ENST00000481641 TMEM88Q6PEY1 159 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms