RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 NFYBP25208 207 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 BLVRBP30043 206 aaPredicted RBP2.88□□□□□ -1.95
UPF3A-207ENST00000481131 SERPINB10P48595 397 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 GNG10P50151 68 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 SPCS2Q15005 226 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 MPV17LQ2QL34 196 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 IDNKQ5T6J7 187 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 UNQ9165/PRO28630Q6UXU0 137 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 CLVS1Q8IUQ0 354 aaPredicted RBP2.88□□□□□ -1.95
UPF3A-207ENST00000481131 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 MRPL30Q8TCC3 161 aaKnown RBP2.88□□□□□ -1.95
UPF3A-207ENST00000481131 CACNG8Q8WXS5 425 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 MAFIPQ8WZ33 124 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 ARHGAP5-AS1Q96IT6 56 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 LINC00477Q96M19 166 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 KCTD7Q96MP8 289 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF714Q96N38 554 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 FAAP24Q9BTP7 215 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 CHCHD7Q9BUK0 85 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 PECRQ9BY49 303 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 CST11Q9H112 138 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 RHOFQ9HBH0 211 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF286AQ9HBT8 521 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 GLS2Q9UI32 602 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 AK3Q9UIJ7 227 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 ATRQ13535 2644 aa2.88□□□□□ -1.95
UPF3A-207ENST00000481131 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 TRGV10A0A0A0MS01 117 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 IGHV2-26A0A0B4J1V2 119 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 hADV38S2A0JD32 116 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 TMEM30CPA0ZSE6 113 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF729A6NN14 1252 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ODF3BA8MYP8 253 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 MCRIP1C9JLW8 97 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 C15orf65H3BRN8 121 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 MFNGO00587 321 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 HBZP02008 142 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 CGB3P0DN86 165 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 CGB7P0DN87 165 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 PRTN3P24158 256 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ERP29P30040 261 aaKnown RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 GNRHRP30968 328 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 SLC35B1P78383 322 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 MEF2CQ06413 473 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 DYNC1I2Q13409 638 aaKnown RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 GPR176Q14439 515 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 HEPN1Q6WQI6 88 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 LINC00596Q86U02 117 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 GAPTQ8N292 157 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ZDHHC22Q8N966 263 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 OR4P4Q8NGL7 312 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 MITD1Q8WV92 249 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ARL11Q969Q4 196 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 MRPS24Q96EL2 167 aaKnown RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF2Q9BSG1 426 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ATG5Q9H1Y0 275 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 DCSTAMPQ9H295 470 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 TMEM133Q9H2Q1 129 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 METTL8Q9H825 291 aaKnown RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 PLEKHJ1Q9NW61 149 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 IDI2-AS1Q9NZ38 188 aa2.87□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF230Q9UIE0 474 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-207ENST00000481131 PLXNB1O43157 2135 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 IGKV1-6A0A0C4DH72 117 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 FUOMA2VDF0 154 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 MEIS3P1A6NDR6 274 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 TMEM235A6NFC5 223 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 H3BUX3 64 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 SDCBPO00560 298 aaPredicted RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 TCF21O43680 179 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HPGDSO60760 199 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 UPK1BO75841 260 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RBBP9O75884 186 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 NAPSAO96009 420 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RBP4P02753 201 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 IL4P05112 153 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HIST1H1DP16402 221 aaKnown RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 CD24P25063 80 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RPL5P46777 297 aaKnown RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 REG1BP48304 166 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 KCNJ3P48549 501 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RAB13P51153 203 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 UBA52P62987 128 aaKnown RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HLA-DRB3P79483 266 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 BAMBIQ13145 260 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 SLC9A3R2Q15599 337 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HMGN3Q15651 99 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 PRSS8Q16651 343 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 ATP6V1FQ16864 119 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HLA-DRB5Q30154 266 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 CDNFQ49AH0 187 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 NEGR1Q7Z3B1 354 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RNF182Q8N6D2 247 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF439Q8NDP4 499 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 ISOC1Q96CN7 298 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 CMSS1Q9BQ75 279 aaKnown RBP2.86□□□□□ -1.95
UPF3A-207ENST00000481131 MAP1LC3CQ9BXW4 147 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms