RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 B2MP61769 119 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 SNRPD3P62318 126 aaKnown RBP8.9□□□□□ -0.98
CCM2-212ENST00000480382 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 TMEM37Q8WXS4 190 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 C17orf77Q96MU5 243 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 GPR82Q96P67 336 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 ATP5SQ99766 215 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 SMIM3Q9BZL3 60 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 PXMP4Q9Y6I8 212 aa8.9□□□□□ -0.98
CCM2-212ENST00000480382 MPDU1O75352 247 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 RPL29P47914 159 aaKnown RBP8.89□□□□□ -0.99
CCM2-212ENST00000480382 PSMB3P49720 205 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 Q6ZRG5 221 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 S100A7AQ86SG5 101 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 STHQ8IWL8 128 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 CHAC2Q8WUX2 184 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 RSG1Q9BU20 258 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
CCM2-212ENST00000480382 SEPSECSQ9HD40 501 aaKnown RBP8.89□□□□□ -0.99
CCM2-212ENST00000480382 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
CCM2-212ENST00000480382 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 ELOA3CA0A087WX78 387 aaPredicted RBP8.88□□□□□ -0.99
CCM2-212ENST00000480382 KIR2DL5BA0A0G2JN68 375 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 KIR2DL5BA0A0G2JPC4 375 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 RPL7P18124 248 aaKnown RBP8.88□□□□□ -0.99
CCM2-212ENST00000480382 ATF4P18848 351 aaPredicted RBP8.88□□□□□ -0.99
CCM2-212ENST00000480382 ID1P41134 155 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 MEOX2P50222 304 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 FGL1Q08830 312 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 Q5BKY6 102 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
CCM2-212ENST00000480382 KIR2DL5AQ8N109 375 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 OR1L4Q8NGR5 311 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 KIR2DL5BQ8NHK3 375 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 ASB13Q8WXK3 278 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 C16orf92Q96LL3 132 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 LINC00052Q96N35 136 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 PFDN5Q99471 154 aa8.88□□□□□ -0.99
CCM2-212ENST00000480382 ISLRO14498 428 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
CCM2-212ENST00000480382 DEFB1P60022 68 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 C20orf173Q96LM9 149 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 OVOL2Q9BRP0 275 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
CCM2-212ENST00000480382 A0A087X0K7 114 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 UBE2CO00762 179 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 CA1P00915 261 aaPredicted RBP8.86□□□□□ -0.99
CCM2-212ENST00000480382 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
CCM2-212ENST00000480382 GDF5OSQ5U4N7 250 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 SAMD13Q5VXD3 122 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 IGFL4Q6B9Z1 124 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 Q6ZWC4 215 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 OR2T35Q8NGX2 323 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 WFDC1Q9HC57 220 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 RNF24Q9Y225 148 aa8.86□□□□□ -0.99
CCM2-212ENST00000480382 FXYD6-FXYD2A0A087WZ82 144 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 F6UB75 175 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 G3V3Q6 166 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 IFNA5P01569 189 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 HLA-DRB4P13762 266 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 C4BPBP20851 252 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 ZNF709Q8N972 641 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 GATAD1Q8WUU5 269 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 AQP10Q96PS8 301 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
CCM2-212ENST00000480382 HLA-DRB4X5D2U9 266 aa8.85□□□□□ -0.99
CCM2-212ENST00000480382 H3BMM0 161 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 H3BTX0 84 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 SPRY2O43597 315 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 SPP1P10451 314 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 HLA-DMBP28068 263 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 FOXI2Q6ZQN5 318 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 SCGB1C1Q8TD33 95 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 RNF183Q96D59 192 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
CCM2-212ENST00000480382 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 TP53TG1Q9Y2A0 90 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
CCM2-212ENST00000480382 RNF222A6NCQ9 220 aa8.83□□□□□ -1
CCM2-212ENST00000480382 SMLR1H3BR10 107 aa8.83□□□□□ -1
CCM2-212ENST00000480382 SLC17A3O00476 420 aa8.83□□□□□ -1
CCM2-212ENST00000480382 IGKV3-20P01619 116 aa8.83□□□□□ -1
CCM2-212ENST00000480382 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
CCM2-212ENST00000480382 IGLC2P0DOY2 106 aa8.83□□□□□ -1
CCM2-212ENST00000480382 CXCL2P19875 107 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms