RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 RPEL1Q2QD12 228 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 FAM106AQ4KMX7 169 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 ZNF506Q5JVG8 444 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 SPANXN5Q5MJ07 72 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 LEMD1Q68G75 181 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 KIR2DL5AQ8N109 375 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 ISOC2Q96AB3 205 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 PINX1Q96BK5 328 aaKnown RBP6.37□□□□□ -1.39
USP54-212ENST00000480210 RAX2Q96IS3 184 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 OR5B12Q96R08 314 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 MAGT1Q9H0U3 335 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 PEMTQ9UBM1 199 aa6.37□□□□□ -1.39
USP54-212ENST00000480210 IFITM10A6NMD0 228 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 C15orf62A8K5M9 175 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 LGALS9O00182 355 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 SSSCA1O60232 199 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 GNG7O60262 68 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 NXPH3O95157 252 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 IAPPP10997 89 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 CD33P20138 364 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 ARL3P36405 182 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
USP54-212ENST00000480210 RAB32Q13637 225 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 Q56UQ5 140 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 RPL7L1Q6DKI1 246 aaKnown RBP6.36□□□□□ -1.39
USP54-212ENST00000480210 ACSM6Q6P461 480 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 KCNIP4Q6PIL6 250 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 TREML4Q6UXN2 200 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 TMEM14EPQ6UXP3 125 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 OR10P1Q8NGE3 313 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 ANAPC16Q96DE5 110 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 SLC35E1Q96K37 410 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 MIEN1Q9BRT3 115 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
USP54-212ENST00000480210 RCL1Q9Y2P8 373 aaKnown RBP6.36□□□□□ -1.39
USP54-212ENST00000480210 LSM5Q9Y4Y9 91 aaKnown RBP6.36□□□□□ -1.39
USP54-212ENST00000480210 PUS1Q9Y606 427 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP54-212ENST00000480210 IGHV4OR15-8A0A075B7B6 117 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 A0A087WW49 117 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 NDUFA4O00483 81 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 OVOL1O14753 267 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 TMEM50AO95807 157 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 PPBPP02775 128 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 RD3LP0DJH9 198 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 S100A7P31151 101 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 PAX9P55771 341 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 S100A10P60903 97 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 BAXQ07812 192 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 KLF5Q13887 457 aaPredicted RBP6.35□□□□□ -1.39
USP54-212ENST00000480210 ATP6V1FQ16864 119 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 C18orf65Q6ZTR6 163 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 Q8WTZ3 238 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 PYGO2Q9BRQ0 406 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 SCRT1Q9BWW7 348 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 SNHG12Q9BXW3 62 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 PRO1933Q9H354 126 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 SIGLEC8Q9NYZ4 499 aa6.35□□□□□ -1.39
USP54-212ENST00000480210 SORL1Q92673 2214 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TRAV9-1A0A075B6T8 112 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 ZNF705GA8MUZ8 300 aaPredicted RBP6.34□□□□□ -1.39
USP54-212ENST00000480210 K7EMT4 169 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 BMPR1BO00238 502 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TRGC2P03986 189 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TYMSP04818 313 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 CTSGP08311 255 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 HOXD3P31249 432 aaPredicted RBP6.34□□□□□ -1.39
USP54-212ENST00000480210 GPR183P32249 361 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 YPEL3P61236 119 aaPredicted RBP6.34□□□□□ -1.39
USP54-212ENST00000480210 HBG1P69891 147 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 HBG2P69892 147 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 COX19Q49B96 90 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TOMM20LQ6UXN7 152 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 C19orf35Q6ZS72 473 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 SMIM12Q96EX1 92 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 C11orf1Q9H5F2 150 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 FNDC4Q9H6D8 234 aaPredicted RBP6.34□□□□□ -1.39
USP54-212ENST00000480210 NPVFQ9HCQ7 196 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 FBXL17Q9UF56 701 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 UFC1Q9Y3C8 167 aa6.34□□□□□ -1.39
USP54-212ENST00000480210 TENM1Q9UKZ4 2725 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 MAP1LC3B2A6NCE7 125 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 OR2T8A6NH00 312 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 PMS2P5A8MQ11 134 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 PRSS46E5RG02 174 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
USP54-212ENST00000480210 AGPAT2O15120 278 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 AMBPP02760 352 aa6.33□□□□□ -1.4
USP54-212ENST00000480210 SRP19P09132 144 aaKnown RBP6.33□□□□□ -1.4
USP54-212ENST00000480210 G0S2P27469 103 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms