RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
NUDCD3-208ENST00000480209 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
NUDCD3-208ENST00000480209 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
NUDCD3-208ENST00000480209 CTXND1A0A1B0GTU2 59 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 A0A1B0GV50 99 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 UMAD1C9J7I0 102 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 MBP02144 154 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 STAG3L2P0CL84 134 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 STAG3L3P0CL85 134 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 ARL14EPLP0DKL9 152 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 FOLR2P14207 255 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 CBLN1P23435 193 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 NPPCP23582 126 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 RHOBP62745 196 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 EIF5AL1Q6IS14 154 aaKnown RBP6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 LCN15Q6UWW0 184 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 PEMTQ9UBM1 199 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 UBQLN2Q9UHD9 624 aa6.77□□□□□ -1.33
NUDCD3-208ENST00000480209 DNAH3Q8TD57 4116 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 NOTCH3Q9UM47 2321 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 MAP1LC3B2A6NCE7 125 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 IZUMO1RA6ND01 250 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 ZNF705EA8MWA4 302 aaPredicted RBP6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 H3BTX0 84 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 J3QL48 77 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 M0QZ24 198 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 NMBP08949 121 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 KRTAP21-3Q3LHN1 58 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 DPPA3Q6W0C5 159 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 MBD3L1Q8WWY6 194 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 MAP1LC3BQ9GZQ8 125 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 TMPRSS5Q9H3S3 457 aa6.76□□□□□ -1.33
NUDCD3-208ENST00000480209 A0A1W2PPV4 95 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 H3BQ15 152 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 TEX46H3BTG2 121 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 SLC17A3O00476 420 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 RGS13O14921 159 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 OR7C2O60412 319 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 SAP30O75446 220 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 IFNA7P01567 189 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 OR10J4P0C629 311 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 IGLC2P0DOY2 106 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 RAB5CP51148 216 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 CCL20P78556 96 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 SIGLEC15Q6ZMC9 328 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 TMEM61Q8N0U2 210 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 RNF141Q8WVD5 230 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 MARC2Q969Z3 335 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 ZNF586Q9NXT0 402 aa6.75□□□□□ -1.33
NUDCD3-208ENST00000480209 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 SOCS3O14543 225 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 IGLL1P15814 213 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 GCHFRP30047 84 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 DEFB114Q30KQ6 69 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 CD300EQ496F6 205 aaPredicted RBP6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 C1orf194Q5T5A4 169 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 ZNF767PQ75MW2 155 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 TCF24Q7RTU0 167 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 OR8I2Q8N0Y5 310 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 WFDC9Q8NEX5 89 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 LYPD6BQ8NI32 183 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 PAXXQ9BUH6 204 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 OR51M1Q9H341 326 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 TMEM14CQ9P0S9 112 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 SORL1Q92673 2214 aa6.74□□□□□ -1.33
NUDCD3-208ENST00000480209 DNHD1Q96M86 4753 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 A0A087X0K7 114 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 NDUFB4O95168 129 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 IGLV1-51P01701 117 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 RPL7P18124 248 aaKnown RBP6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 CD33P20138 364 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 TAS2R45P59539 299 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 BPIFA4PQ86YQ2 179 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 FAM24BQ8N5W8 94 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 SUN5Q8TC36 379 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 DYNLRB2Q8TF09 96 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 SAT2Q96F10 170 aaPredicted RBP6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 GRAMD2BQ96HH9 432 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 NARS2Q96I59 477 aaKnown RBP6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 TMEM231Q9H6L2 316 aa6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 YTHDF2Q9Y5A9 579 aaKnown RBP6.73□□□□□ -1.33
NUDCD3-208ENST00000480209 AGRNO00468 2067 aa6.72□□□□□ -1.33
NUDCD3-208ENST00000480209 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
NUDCD3-208ENST00000480209 TRBV19A0A075B6N1 114 aa6.72□□□□□ -1.33
NUDCD3-208ENST00000480209 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
NUDCD3-208ENST00000480209 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms