RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 FDCSPQ8NFU4 85 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 DUX5Q96PT3 197 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 PGPEP1Q9NXJ5 209 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 SONP18583 2426 aaKnown RBP5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNHIT1O43257 154 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 LYPD6Q86Y78 171 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 ATP6V0BQ99437 205 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 KLHDC3Q9BQ90 382 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 V9GYV3 84 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 A0A087WV48 116 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV2-70DA0A0C4DH43 119 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 SPINK8P0C7L1 97 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 GNG5P63218 68 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 PLAURQ03405 335 aa5.02□□□□□ -1.61
PRPF4B-205ENST00000480058 SLC25A16P16260 332 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 SFTA2Q6UW10 78 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 DOPEY1Q5JWR5 2465 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 IGKV1-6A0A0C4DH72 117 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 TIMM23O14925 209 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 CD28P10747 220 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 ATP5J2P56134 94 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 SCN2AQ99250 2005 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 A0A0G2JRQ6 117 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 NPIPB5A8MRT5 1133 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 NDUFA3O95167 84 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 ETDBQ3ZM63 59 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 SCRT1Q9BWW7 348 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 LINC00473A8K010 186 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV3-48P01763 117 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 CELA3AP09093 270 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 CD7P09564 240 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM27E3Q08E93 113 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 JMJD8Q96S16 334 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 INS-IGF2F8WCM5 200 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 CLPSP04118 112 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 IFITM1P13164 125 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 IGLL1P15814 213 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 FOXL2P58012 376 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 NDUFA4L2Q9NRX3 87 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 HIGD1BQ9P298 99 aa5.01□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV1-18A0A0C4DH31 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 SMIM27A0A1W2PRY6 76 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE12JA6NER3 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 LILRA1O75019 489 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE7O76087 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TNFRSF6BO95407 300 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE12FP0CL80 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE12GP0CL81 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE12IP0CL82 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 B3GALT5-AS1P59052 145 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 GAGE4Q13068 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 ADAMTSL5Q6ZMM2 481 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 Q6ZVH6 145 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TRAV5A0A0B4J249 113 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 LTBRP36941 435 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 C2orf66Q6UXQ4 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 RNF138Q8WVD3 245 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 MRPL53Q96EL3 112 aaKnown RBP5□□□□□ -1.61
PRPF4B-205ENST00000480058 DUX3Q96PT4 197 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 IGHV1-3A0A0C4DH29 117 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TMEM178BH3BS89 294 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 Q6ZWC4 215 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF329Q86UD4 541 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TMEM158Q8WZ71 300 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 KAAG1Q9UBP8 84 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TRAV2A0A0B4J234 112 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 TRAV41A0A0B4J266 112 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5□□□□□ -1.61
PRPF4B-205ENST00000480058 BSPH1Q075Z2 132 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 MDS2Q8NDY4 140 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 CRIM1Q9NZV1 1036 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 HIVEP2P31629 2446 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 LRRK1Q38SD2 2015 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 A0A087X0K7 114 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 CGB1A6NKQ9 187 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM223BA6NKX1 122 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 RPL15P61313 204 aaKnown RBP5□□□□□ -1.61
PRPF4B-205ENST00000480058 CLEC19AQ6UXS0 136 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 FAM223AQ8IWN6 122 aa5□□□□□ -1.61
PRPF4B-205ENST00000480058 PSMB11A5LHX3 300 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 H3BMM0 161 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 HLA-DMBP28068 263 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 ARTNQ5T4W7 220 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 ZNF493Q6ZR52 646 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 SPATA12Q7Z6I5 190 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 THAP8Q8NA92 274 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 AKIRIN1Q9H9L7 192 aaPredicted RBP4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 RALGAPA1Q6GYQ0 2036 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 DOCK6Q96HP0 2047 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 HEATR1Q9H583 2144 aaKnown RBP4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 SIGLEC15Q6ZMC9 328 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 C1orf122Q6ZSJ8 110 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 TRPT1Q86TN4 253 aaKnown RBP4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 GTSF1LQ9H1H1 148 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 LSM4Q9Y4Z0 139 aaKnown RBP4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 TRAV8-1A0A0A6YYK1 113 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 TMEM8BA6NDV4 472 aa4.99□□□□□ -1.61
PRPF4B-205ENST00000480058 EFNA4P52798 201 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms