RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	OR1L4	Q8NGR5	311 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PPP1R14B	Q96C90	147 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PFDN5	Q99471	154 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	PBDC1	Q9BVG4	233 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	WDR61	Q9GZS3	305 aa	Known RBP	11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	ZFAND3	Q9H8U3	227 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	FBXL17	Q9UF56	701 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	SMPX	Q9UHP9	88 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	FAT2	Q9NYQ8	4349 aa		11.54	□□□□□ -0.56
HDLBP-238	ENST00000479894	KANTR	A0A1W2PQU2	76 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	TMEM213	A2RRL7	107 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	LINC00869	P0C866	280 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	CRYBB3	P26998	211 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	ZFP69	Q49AA0	526 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	TM4SF20	Q53R12	229 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	C1orf194	Q5T5A4	169 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894		Q6ZWC4	215 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	NPCDR1	Q9BY65	106 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	KRTAP4-5	Q9BYR2	181 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	SMIM3	Q9BZL3	60 aa		11.53	□□□□□ -0.56
HDLBP-238	ENST00000479894	RNF222	A6NCQ9	220 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	HELT	A6NFD8	242 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894		G3V3Q6	166 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	PFDN1	O60925	122 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	ORM2	P19652	201 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	TCTA	P57738	103 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	PAFAH1B2	P68402	229 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	DEFB114	Q30KQ6	69 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	KCNRG	Q8N5I3	272 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	GPR82	Q96P67	336 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	RNF2	Q99496	336 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	MGST2	Q99735	147 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	ARPC5L	Q9BPX5	153 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	RHPN1-AS1	Q9BWJ2	59 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	SLC39A9	Q9NUM3	307 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	HIGD1A	Q9Y241	93 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	TIMM9	Q9Y5J7	89 aa		11.52	□□□□□ -0.57
HDLBP-238	ENST00000479894	DNAH2	Q9P225	4427 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894		A0A1B0GVG6	124 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	SMLR1	H3BR10	107 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	COX7A2P2	O60397	106 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	B2M	P61769	119 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	OPCML	Q14982	345 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	GUCA2B	Q16661	112 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	STPG3	Q8N7X2	389 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR1B1	Q8NGR6	318 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	DNAJC4	Q9NNZ3	241 aa		11.51	□□□□□ -0.57
HDLBP-238	ENST00000479894	DYNC1H1	Q14204	4646 aa	Known RBP	11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	DNAH17	Q9UFH2	4485 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	CHEK1	O14757	476 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	SPRY2	O43597	315 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	MB	P02144	154 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR5G3	P0C626	314 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	SERF2	P84101	59 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	SAMD13	Q5VXD3	122 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	ARL6	Q9H0F7	186 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	VSIR	Q9H7M9	311 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	PXMP4	Q9Y6I8	212 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	DNAH11	Q96DT5	4516 aa		11.5	□□□□□ -0.57
HDLBP-238	ENST00000479894	IGHV3OR16-8	A0A075B7F1	116 aa		11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	ZNF207	O43670	478 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	CMC4	P56277	68 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	USF2	Q15853	346 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	C10orf113	Q5VZT2	155 aa		11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	PSMG3	Q9BT73	122 aa	Predicted RBP	11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894		U3KQE9	123 aa		11.49	□□□□□ -0.57
HDLBP-238	ENST00000479894	UBE2C	O00762	179 aa		11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	MEOX2	P50222	304 aa		11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	EIF5AL1	Q6IS14	154 aa	Known RBP	11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR8I2	Q8N0Y5	310 aa		11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR11H4	Q8NGC9	324 aa		11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	SPAG8	Q99932	426 aa	Predicted RBP	11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	PLA2G2E	Q9NZK7	142 aa		11.48	□□□□□ -0.57
HDLBP-238	ENST00000479894	TRAV2	A0A0B4J234	112 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR4C46	A6NHA9	309 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	TSPAN4	O14817	238 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	BCL2L11	O43521	198 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	BUB3	O43684	328 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	RPL7	P18124	248 aa	Known RBP	11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	GATA2	P23769	480 aa	Predicted RBP	11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	GALR1	P47211	349 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	APOC4	P55056	127 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	RPL11	P62913	178 aa	Known RBP	11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	MIC13	Q5XKP0	118 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	TMUB2	Q71RG4	321 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	SHANK2-AS3	Q9BTD1	123 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	ARV1	Q9H2C2	271 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	WFDC1	Q9HC57	220 aa		11.47	□□□□□ -0.57
HDLBP-238	ENST00000479894	ZNF98	A6NK75	572 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	RPL7L1	Q6DKI1	246 aa	Known RBP	11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	C16orf54	Q6UWD8	224 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	TCF24	Q7RTU0	167 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	HSD17B11	Q8NBQ5	300 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	STXBP6	Q8NFX7	210 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	OR2G3	Q8NGZ4	309 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	ST8SIA2	Q92186	375 aa		11.46	□□□□□ -0.57
HDLBP-238	ENST00000479894	ZNF414	Q96IQ9	312 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms