RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	GALR1	P47211	349 aa		13.4	□□□□□ -0.26
RFK-204	ENST00000479197	CMC4	P56277	68 aa	Predicted RBP	13.4	□□□□□ -0.26
RFK-204	ENST00000479197	ZNF266	Q14584	549 aa		13.4	□□□□□ -0.26
RFK-204	ENST00000479197	hCG_2014768	A0A024R1R8	64 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	ARPC5	O15511	151 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	FAM24B	Q8N5W8	94 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	B9D2	Q9BPU9	175 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	RSG1	Q9BU20	258 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	SRD5A3	Q9H8P0	318 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	MAP6D1	Q9H9H5	199 aa		13.39	□□□□□ -0.27
RFK-204	ENST00000479197	RPL7	P18124	248 aa	Known RBP	13.39	□□□□□ -0.27
RFK-204	ENST00000479197	DNAH9	Q9NYC9	4486 aa		13.38	□□□□□ -0.27
RFK-204	ENST00000479197	GATAD1	Q8WUU5	269 aa		13.38	□□□□□ -0.27
RFK-204	ENST00000479197	ST6GAL2	Q96JF0	529 aa		13.38	□□□□□ -0.27
RFK-204	ENST00000479197	ZNF688	P0C7X2	276 aa		13.37	□□□□□ -0.27
RFK-204	ENST00000479197	GCSAML	Q5JQS6	135 aa		13.37	□□□□□ -0.27
RFK-204	ENST00000479197	MORN5	Q5VZ52	161 aa		13.37	□□□□□ -0.27
RFK-204	ENST00000479197	APRG1	Q8IVJ8	170 aa		13.37	□□□□□ -0.27
RFK-204	ENST00000479197	MFF	Q9GZY8	342 aa		13.37	□□□□□ -0.27
RFK-204	ENST00000479197	SEPSECS	Q9HD40	501 aa	Known RBP	13.37	□□□□□ -0.27
RFK-204	ENST00000479197	MEOX2	P50222	304 aa		13.36	□□□□□ -0.27
RFK-204	ENST00000479197	DEFB131A	P59861	70 aa		13.36	□□□□□ -0.27
RFK-204	ENST00000479197	SNRPD3	P62318	126 aa	Known RBP	13.36	□□□□□ -0.27
RFK-204	ENST00000479197	OR11H4	Q8NGC9	324 aa		13.36	□□□□□ -0.27
RFK-204	ENST00000479197	CITED4	Q96RK1	184 aa		13.36	□□□□□ -0.27
RFK-204	ENST00000479197	HMSD	A8MTL9	139 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	ATF4	P18848	351 aa	Predicted RBP	13.35	□□□□□ -0.27
RFK-204	ENST00000479197	ZNF124	Q15973	351 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	FFAR4	Q5NUL3	377 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	SAMD13	Q5VXD3	122 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	TCTE3	Q8IZS6	198 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	TIMM9	Q9Y5J7	89 aa		13.35	□□□□□ -0.27
RFK-204	ENST00000479197	RBMY1B	A6NDE4	496 aa	Known RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	RBMY1E	A6NEQ0	496 aa	Known RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	SOCS3	O14543	225 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	MRPS12	O15235	138 aa	Known RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	RBMY1D	P0C7P1	496 aa	Known RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	ZNF345	Q14585	488 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	BPIFA4P	Q86YQ2	179 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	HSD17B11	Q8NBQ5	300 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	C17orf77	Q96MU5	243 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	ISLR	O14498	428 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	TAAR5	O14804	337 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	ID1	P41134	155 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	PSMB3	P49720	205 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	PSMG4	Q5JS54	123 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	FAM78B	Q5VT40	261 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	RPL7L1	Q6DKI1	246 aa	Known RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.34	□□□□□ -0.27
RFK-204	ENST00000479197	AKAP14	Q86UN6	197 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197	RFNG	Q9Y644	331 aa		13.34	□□□□□ -0.27
RFK-204	ENST00000479197		A0A087X0K7	114 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197	TRAV5	A0A0B4J249	113 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197		A0A1B0GVG6	124 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197	SBSPON	Q8IVN8	264 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197	C16orf92	Q96LL3	132 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197	ASCL2	Q99929	193 aa		13.33	□□□□□ -0.28
RFK-204	ENST00000479197	MRPL32	Q9BYC8	188 aa	Known RBP	13.33	□□□□□ -0.28
RFK-204	ENST00000479197	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.32	□□□□□ -0.28
RFK-204	ENST00000479197	ATP6V0C	P27449	155 aa		13.32	□□□□□ -0.28
RFK-204	ENST00000479197	KCNRG	Q8N5I3	272 aa		13.32	□□□□□ -0.28
RFK-204	ENST00000479197	PSMG3	Q9BT73	122 aa	Predicted RBP	13.32	□□□□□ -0.28
RFK-204	ENST00000479197	TG	P01266	2768 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	JTB	O76095	146 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	OR2G3	Q8NGZ4	309 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	LINC00052	Q96N35	136 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	ARPC5L	Q9BPX5	153 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	FUT9	Q9Y231	359 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197	COL7A1	Q02388	2944 aa		13.31	□□□□□ -0.28
RFK-204	ENST00000479197		A0A0D9SG52	128 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	IGLC2	P0DOY2	106 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	HAGH	Q16775	308 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.3	□□□□□ -0.28
RFK-204	ENST00000479197	SPATA31B1P	Q5VZV4	182 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	MIR17HG	Q75NE6	70 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.3	□□□□□ -0.28
RFK-204	ENST00000479197	HRH4	Q9H3N8	390 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	CYTL1	Q9NRR1	136 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	AGRN	O00468	2067 aa		13.3	□□□□□ -0.28
RFK-204	ENST00000479197	NHLRC4	P0CG21	123 aa	Predicted RBP	13.29	□□□□□ -0.28
RFK-204	ENST00000479197	CXCL2	P19875	107 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	M6PR	P20645	277 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	RHOB	P62745	196 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	LCN15	Q6UWW0	184 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	SLC25A2	Q9BXI2	301 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	SH3BGRL3	Q9H299	93 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	TMEM14C	Q9P0S9	112 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.29	□□□□□ -0.28
RFK-204	ENST00000479197	C1QB	P02746	253 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	SNRPC	P09234	159 aa	Known RBP	13.29	□□□□□ -0.28
RFK-204	ENST00000479197	RPL35A	P18077	110 aa	Known RBP	13.29	□□□□□ -0.28
RFK-204	ENST00000479197	SERF2	P84101	59 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	ACTL10	Q5JWF8	245 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	STH	Q8IWL8	128 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	LRRC20	Q8TCA0	184 aa		13.29	□□□□□ -0.28
RFK-204	ENST00000479197	TRAV8-2	A0A0B4J237	113 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	KANTR	A0A1W2PQU2	76 aa		13.28	□□□□□ -0.28
RFK-204	ENST00000479197	KNCN	A6PVL3	124 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms