RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 HYPMO75409 117 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 LINC00869P0C866 280 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF705DP0CH99 300 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF705BP0CI00 300 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-215ENST00000478473 DEFB1P60022 68 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 RRAS2P62070 204 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-215ENST00000478473 MZT2BQ6NZ67 158 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 C2orf50Q96LR7 162 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 SCRT1Q9BWW7 348 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 RPRMQ9NS64 109 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 XCL2Q9UBD3 114 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 HIGD1AQ9Y241 93 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 TCTAP57738 103 aa16.9■□□□□ 0.3
C9orf3-215ENST00000478473 RAP2BP61225 183 aa16.9■□□□□ 0.3
C9orf3-215ENST00000478473 S100A7AQ86SG5 101 aa16.9■□□□□ 0.3
C9orf3-215ENST00000478473 C16orf92Q96LL3 132 aa16.9■□□□□ 0.3
C9orf3-215ENST00000478473 C20orf173Q96LM9 149 aa16.9■□□□□ 0.3
C9orf3-215ENST00000478473 C11orf94C9JXX5 98 aa16.89■□□□□ 0.29
C9orf3-215ENST00000478473 RPL7P18124 248 aaKnown RBP16.89■□□□□ 0.29
C9orf3-215ENST00000478473 PATE2Q6UY27 113 aa16.89■□□□□ 0.29
C9orf3-215ENST00000478473 PTTG2Q9NZH5 202 aa16.89■□□□□ 0.29
C9orf3-215ENST00000478473 RNF24Q9Y225 148 aa16.89■□□□□ 0.29
C9orf3-215ENST00000478473 A0A087X0K7 114 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 TRAV8-2A0A0B4J237 113 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 SMIM9A6NGZ8 99 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 UPK1BO75841 260 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 EBLN2Q6P2I7 272 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 ZNF546Q86UE3 836 aa16.88■□□□□ 0.29
C9orf3-215ENST00000478473 C5orf51A6NDU8 294 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 L7N2F9 121 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 AGPAT2O15120 278 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 MRPS12O15235 138 aaKnown RBP16.87■□□□□ 0.29
C9orf3-215ENST00000478473 VAMP2P63027 116 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 PSG9Q00887 426 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 SLC38A11Q08AI6 406 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 FAM78BQ5VT40 261 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 LGALS9CQ6DKI2 356 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 AMTNQ6UX39 209 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 DOK5Q9P104 306 aa16.87■□□□□ 0.29
C9orf3-215ENST00000478473 FAM25EA8MYX2 175 aa16.86■□□□□ 0.29
C9orf3-215ENST00000478473 F6UB75 175 aa16.86■□□□□ 0.29
C9orf3-215ENST00000478473 VWC2Q2TAL6 325 aa16.86■□□□□ 0.29
C9orf3-215ENST00000478473 GSG1LQ6UXU4 331 aa16.86■□□□□ 0.29
C9orf3-215ENST00000478473 C2CD4CQ8TF44 421 aa16.86■□□□□ 0.29
C9orf3-215ENST00000478473 LSM5Q9Y4Y9 91 aaKnown RBP16.86■□□□□ 0.29
C9orf3-215ENST00000478473 LY6G6CO95867 125 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 OR5G3P0C626 314 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 HLA-DMBP28068 263 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 IFITM3Q01628 133 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 OR4B1Q8NGF8 309 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 UHRF2Q96PU4 802 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 MGST2Q99735 147 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 ARL6Q9H0F7 186 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 ARV1Q9H2C2 271 aa16.85■□□□□ 0.29
C9orf3-215ENST00000478473 LYRM2Q9NU23 88 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-215ENST00000478473 GOSR2O14653 212 aa16.84■□□□□ 0.29
C9orf3-215ENST00000478473 IGKV3-20P01619 116 aa16.84■□□□□ 0.29
C9orf3-215ENST00000478473 PVALBP20472 110 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-215ENST00000478473 CHAC2Q8WUX2 184 aa16.84■□□□□ 0.29
C9orf3-215ENST00000478473 SLC35B3Q9H1N7 401 aa16.84■□□□□ 0.29
C9orf3-215ENST00000478473 WDR83OSQ9Y284 106 aa16.83■□□□□ 0.28
C9orf3-215ENST00000478473 TMEM189A5PLL7 270 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 FAM24AA6NFZ4 105 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 DUSP14O95147 198 aaKnown RBP16.82■□□□□ 0.28
C9orf3-215ENST00000478473 CXCL2P19875 107 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 CAV2P51636 162 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 PRR20EP86478 221 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 PRR20CP86479 221 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 PRR20DP86480 221 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 PRR20BP86481 221 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 PRR20AP86496 221 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 RAB32Q13637 225 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 Q6ZTC4 211 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 C1orf158Q8N1D5 194 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 TMEM252Q8N6L7 170 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 TMEM37Q8WXS4 190 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 CELA1Q9UNI1 258 aa16.82■□□□□ 0.28
C9orf3-215ENST00000478473 TRAV10A0A0B4J240 114 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 CST7O76096 145 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 AMBPP02760 352 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 CXCL3P19876 107 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 S100A11P31949 105 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 SULT1A1P50225 295 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 BCAP31P51572 246 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 FXYD7P58549 80 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 C12orf74Q32Q52 190 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 ENKURQ8TC29 256 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 GPN1Q9HCN4 374 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-215ENST00000478473 UQCC1Q9NVA1 299 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 APLNQ9ULZ1 77 aa16.81■□□□□ 0.28
C9orf3-215ENST00000478473 EPPK1P58107 5090 aaKnown RBP16.81■□□□□ 0.28
C9orf3-215ENST00000478473 CAMLGP49069 296 aa16.8■□□□□ 0.28
C9orf3-215ENST00000478473 CNN1P51911 297 aaKnown RBP16.8■□□□□ 0.28
C9orf3-215ENST00000478473 LINC00305Q7Z4B0 112 aa16.8■□□□□ 0.28
C9orf3-215ENST00000478473 IGF2BP2-AS1Q96M15 143 aa16.8■□□□□ 0.28
C9orf3-215ENST00000478473 RFNGQ9Y644 331 aa16.8■□□□□ 0.28
C9orf3-215ENST00000478473 PRAF2O60831 178 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 RAB31Q13636 194 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 IGFL4Q6B9Z1 124 aa16.79■□□□□ 0.28
C9orf3-215ENST00000478473 RNF182Q8N6D2 247 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms