RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 FAAP20Q6NZ36 180 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 THAP8Q8NA92 274 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 OR11H7Q8NGC8 314 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 OR4C16Q8NGL9 310 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 OR1B1Q8NGR6 318 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 C17orf77Q96MU5 243 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 GPR82Q96P67 336 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 PRRT1Q99946 306 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 RSG1Q9BU20 258 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 SLC25A32Q9H2D1 315 aa6.75□□□□□ -1.33
CCM2-210ENST00000478169 IGKV1OR2-108A0A075B7D4 117 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 PIGBOS1A0A0B4J2F0 54 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 PLAC8L1A1L4L8 177 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 ZNF98A6NK75 572 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 M0R2Z0 102 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 PRM2P04554 102 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 AKAIN1P0CW23 69 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 AKR1C4P17516 323 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 DEFA1P59665 94 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 DEFA3P59666 94 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 CLINT1Q14677 625 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 Q6ZNX1 250 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 LYZL2Q7Z4W2 148 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 SMIM4Q8WVI0 70 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 Q9H8V8 135 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 SLC25A22Q9H936 323 aa6.74□□□□□ -1.33
CCM2-210ENST00000478169 PAIP2BQ9ULR5 123 aaKnown RBP6.74□□□□□ -1.33
CCM2-210ENST00000478169 AZU1P20160 251 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
CCM2-210ENST00000478169 TAS2R60P59551 318 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 SRPXP78539 464 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 FCN2Q15485 313 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 TTC32Q5I0X7 151 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 BAP18Q8IXM2 172 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 BPIFCQ8NFQ6 507 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 OR51S1Q8NGJ8 323 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 RNF141Q8WVD5 230 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 C16orf74Q96GX8 76 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 LINC01587Q99440 93 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 PRR13Q9NZ81 148 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 SCP2D1Q9UJQ7 156 aa6.73□□□□□ -1.33
CCM2-210ENST00000478169 TIMM8BQ9Y5J9 83 aaPredicted RBP6.73□□□□□ -1.33
CCM2-210ENST00000478169 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 DUXBA0A1W2PPF3 345 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 A0A1W2PPQ1 181 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 BOLA2-SMG1P6H3BVE0 249 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 PITX3O75364 302 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 ANXA3P12429 323 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 RPP30P78346 268 aaKnown RBP6.72□□□□□ -1.33
CCM2-210ENST00000478169 CTF1Q16619 201 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 TMEM147Q9BVK8 224 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 MIXL1Q9H2W2 232 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 Q9H3A6 140 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 RABL2AQ9UBK7 228 aaPredicted RBP6.72□□□□□ -1.33
CCM2-210ENST00000478169 RABL2BQ9UNT1 228 aa6.72□□□□□ -1.33
CCM2-210ENST00000478169 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 CTDSPLO15194 276 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 RGS5O15539 181 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 MED6O75586 246 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 ORM2P19652 201 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 IGFL4Q6B9Z1 124 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 TMEM144Q7Z5S9 345 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 CIB3Q96Q77 187 aaPredicted RBP6.71□□□□□ -1.34
CCM2-210ENST00000478169 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
CCM2-210ENST00000478169 CCDC59Q9P031 241 aaKnown RBP6.71□□□□□ -1.34
CCM2-210ENST00000478169 DMBT1Q9UGM3 2413 aaPredicted RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 ANKRD20A5PA0PJZ0 165 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 PRSS46E5RG02 174 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 CTDSP2O14595 271 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 ADAP1O75689 374 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 IAPPP10997 89 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 SLC25A6P12236 298 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 RPL7P18124 248 aaKnown RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 GATA2P23769 480 aaPredicted RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 RHOBP62745 196 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 FGL1Q08830 312 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 SPANXN2Q5MJ10 180 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 TMEM182Q6ZP80 229 aaPredicted RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 OR8A1Q8NGG7 326 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 MCFD2Q8NI22 146 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 GNPNAT1Q96EK6 184 aaPredicted RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
CCM2-210ENST00000478169 SLC25A39Q9BZJ4 359 aaPredicted RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 NAA50Q9GZZ1 169 aaKnown RBP6.7□□□□□ -1.34
CCM2-210ENST00000478169 PPP1R14DQ9NXH3 145 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms