RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 SAT2Q96F10 170 aaPredicted RBP4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 ZNF2Q9BSG1 426 aaPredicted RBP4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 MUC2Q02817 5179 aa4.84□□□□□ -1.63
SPTLC1-205ENST00000477888 TRAV8-2A0A0B4J237 113 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 CTDSP2O14595 271 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 IGLV2-8P01709 118 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 CRYGDP07320 174 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 HTR2BP41595 481 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 MEOX2P50222 304 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 TAS2R20P59543 309 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 WFDC2Q14508 124 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 PHLDA2Q53GA4 152 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 C2orf83Q53S99 150 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 LELP1Q5T871 98 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 OR8I2Q8N0Y5 310 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 C10orf126Q8N4M7 172 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 LRTM2Q8N967 370 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 RNASEH2CQ8TDP1 164 aaKnown RBP4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 TMEM170AQ8WVE7 144 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 RRNAD1Q96FB5 475 aaKnown RBP4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 PBDC1Q9BVG4 233 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 EHFQ9NZC4 300 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 RRP15Q9Y3B9 282 aaKnown RBP4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 ICOSQ9Y6W8 199 aa4.83□□□□□ -1.64
SPTLC1-205ENST00000477888 TRAV18A0A075B6X5 111 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 PAX4O43316 350 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 ZNF182P17025 639 aaPredicted RBP4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 MLLT11Q13015 90 aaPredicted RBP4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 DAZ2Q13117 558 aaKnown RBP4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 GAMTQ14353 236 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 LINC01620Q4KN68 170 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 C8orf59Q8N0T1 100 aaPredicted RBP4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 DHRSXQ8N5I4 330 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 ZBTB8BQ8NAP8 495 aaPredicted RBP4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 RSG1Q9BU20 258 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 ENY2Q9NPA8 101 aa4.82□□□□□ -1.64
SPTLC1-205ENST00000477888 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 IGKV1D-37A0A075B6S9 117 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 SMIM30A4D0T7 59 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 C9orf118A6NHY6 69 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 PMP2P02689 132 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 OR5AC1P0C628 307 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 CDKN1BP46527 198 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 RPL37AP61513 92 aaKnown RBP4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 ZNF90Q03938 601 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 ASAH1Q13510 395 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 MRPL23Q16540 153 aaKnown RBP4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 ACOT6Q3I5F7 207 aaPredicted RBP4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 AARDQ4LEZ3 155 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 ETFRF1Q6IPR1 90 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 Q6ZRU5 148 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 NEGR1Q7Z3B1 354 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 RNF182Q8N6D2 247 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 IL22RA2Q969J5 263 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 ACY3Q96HD9 319 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 C20orf144Q9BQM9 153 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 PDCD10Q9BUL8 212 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 DNAJC4Q9NNZ3 241 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 RHBDL2Q9NX52 303 aa4.81□□□□□ -1.64
SPTLC1-205ENST00000477888 TRAV5A0A0B4J249 113 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 MEIS3P1A6NDR6 274 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 SNRPGP15A8MWD9 76 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 SNURFLB1AK76 121 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 PRAF2O60831 178 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 MYL9P24844 172 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 CBX5P45973 191 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 GALR1P47211 349 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 CRYBA4P53673 196 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 SPCS3P61009 180 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 RHOBP62745 196 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 HIST1H1AQ02539 215 aaPredicted RBP4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 NHLH2Q02577 135 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 IDNKQ5T6J7 187 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 LPCAT3Q6P1A2 487 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 OR8A1Q8NGG7 326 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 OR52E5Q8NH55 327 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 SLC25A38Q96DW6 304 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 MGLLQ99685 303 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 S100A14Q9HCY8 104 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 DIABLOQ9NR28 239 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 PRO0255Q9UI72 69 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 ANAPC10Q9UM13 185 aa4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 RCL1Q9Y2P8 373 aaKnown RBP4.8□□□□□ -1.64
SPTLC1-205ENST00000477888 TRDV1A0A1B0GX56 115 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 ATP5HO75947 161 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 S100GP29377 79 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 LYZP61626 148 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 ZNF415Q09FC8 603 aa4.79□□□□□ -1.64
SPTLC1-205ENST00000477888 PSG3Q16557 428 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms