RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 RLN2P04090 185 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 LYL1P12980 280 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 PSMB3P49720 205 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 HBG1P69891 147 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 HBG2P69892 147 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 BAXQ07812 192 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 CASC10Q5T4H9 136 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 C20orf173Q96LM9 149 aa16.35■□□□□ 0.21
SF1-214ENST00000477596 A0A0J9YWU9 116 aa16.34■□□□□ 0.21
SF1-214ENST00000477596 CXCL3P19876 107 aa16.34■□□□□ 0.21
SF1-214ENST00000477596 FGF7P21781 194 aa16.34■□□□□ 0.21
SF1-214ENST00000477596 MORN5Q5VZ52 161 aa16.34■□□□□ 0.21
SF1-214ENST00000477596 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
SF1-214ENST00000477596 H3BMM0 161 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 MPC2O95563 127 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 ID1P41134 155 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 IGFL4Q6B9Z1 124 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 OR5C1Q8NGR4 320 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 TMEM37Q8WXS4 190 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 C16orf92Q96LL3 132 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 GPR82Q96P67 336 aa16.33■□□□□ 0.2
SF1-214ENST00000477596 DYNC2H1Q8NCM8 4307 aaKnown RBP16.33■□□□□ 0.2
SF1-214ENST00000477596 F6UB75 175 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 ISLRO14498 428 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 COX7A2P2O60397 106 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 HLA-DRB4P13762 266 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 S100A7P31151 101 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 PRR20EP86478 221 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 PRR20CP86479 221 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 PRR20DP86480 221 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 PRR20BP86481 221 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 PRR20AP86496 221 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 FGL1Q08830 312 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 CLINT1Q14677 625 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 OPCMLQ14982 345 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 LINC00305Q7Z4B0 112 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 THAP6Q8TBB0 222 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 SLC25A31Q9H0C2 315 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 CLEC5AQ9NY25 188 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 HLA-DRB4X5D2U9 266 aa16.32■□□□□ 0.2
SF1-214ENST00000477596 TRAV8-2A0A0B4J237 113 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 IGKV3-20P01619 116 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 SPP1P10451 314 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 RPL7P18124 248 aaKnown RBP16.31■□□□□ 0.2
SF1-214ENST00000477596 ATF4P18848 351 aaPredicted RBP16.31■□□□□ 0.2
SF1-214ENST00000477596 MEOX2P50222 304 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 RAB31Q13636 194 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 ATP6V1FQ16864 119 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 PXDC1Q5TGL8 231 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 MBD2Q9UBB5 411 aa16.31■□□□□ 0.2
SF1-214ENST00000477596 MRPS12O15235 138 aaKnown RBP16.3■□□□□ 0.2
SF1-214ENST00000477596 SNRPCP09234 159 aaKnown RBP16.3■□□□□ 0.2
SF1-214ENST00000477596 FCN2Q15485 313 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 MORN3Q6PF18 240 aaPredicted RBP16.3■□□□□ 0.2
SF1-214ENST00000477596 RNF182Q8N6D2 247 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 OR11H7Q8NGC8 314 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 OR11H2Q8NH07 326 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 GATAD1Q8WUU5 269 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 RARRES2Q99969 163 aa16.3■□□□□ 0.2
SF1-214ENST00000477596 SAV1Q9H4B6 383 aaPredicted RBP16.3■□□□□ 0.2
SF1-214ENST00000477596 B2MP61769 119 aa16.29■□□□□ 0.2
SF1-214ENST00000477596 C10orf113Q5VZT2 155 aa16.29■□□□□ 0.2
SF1-214ENST00000477596 FOXI2Q6ZQN5 318 aa16.29■□□□□ 0.2
SF1-214ENST00000477596 SLC39A9Q9NUM3 307 aa16.29■□□□□ 0.2
SF1-214ENST00000477596 PXMP4Q9Y6I8 212 aa16.29■□□□□ 0.2
SF1-214ENST00000477596 PRB4P10163 310 aaPredicted RBP16.28■□□□□ 0.2
SF1-214ENST00000477596 HLA-DMBP28068 263 aa16.28■□□□□ 0.2
SF1-214ENST00000477596 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
SF1-214ENST00000477596 NPCDR1Q9BY65 106 aa16.28■□□□□ 0.2
SF1-214ENST00000477596 A0A087X0K7 114 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 TRAV5A0A0B4J249 113 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 PET100P0DJ07 73 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 FXYD7P58549 80 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 GCSAMLQ5JQS6 135 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 SAMD13Q5VXD3 122 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 Q6ZRG5 221 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 MED28Q9H204 178 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 HSPB11Q9Y547 144 aa16.27■□□□□ 0.2
SF1-214ENST00000477596 ELOA3CA0A087WX78 387 aaPredicted RBP16.26■□□□□ 0.19
SF1-214ENST00000477596 A0A0J9YX75 114 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 H3BTX0 84 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 DEFB4AO15263 64 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 S100A7AQ86SG5 101 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 CSNK1G2-AS1Q8NCQ2 148 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 IL17DQ8TAD2 202 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 CHAC2Q8WUX2 184 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 SMIM3Q9BZL3 60 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 DNAJC4Q9NNZ3 241 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 RPRMQ9NS64 109 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 XCL2Q9UBD3 114 aa16.26■□□□□ 0.19
SF1-214ENST00000477596 RPL12P30050 165 aaKnown RBP16.25■□□□□ 0.19
SF1-214ENST00000477596 RGS21Q2M5E4 152 aa16.25■□□□□ 0.19
SF1-214ENST00000477596 FAM78BQ5VT40 261 aa16.25■□□□□ 0.19
SF1-214ENST00000477596 OR4B1Q8NGF8 309 aa16.25■□□□□ 0.19
SF1-214ENST00000477596 MPDU1O75352 247 aa16.24■□□□□ 0.19
SF1-214ENST00000477596 ZNF705DP0CH99 300 aaPredicted RBP16.24■□□□□ 0.19
SF1-214ENST00000477596 ZNF705BP0CI00 300 aaPredicted RBP16.24■□□□□ 0.19
SF1-214ENST00000477596 TMEM41BQ5BJD5 291 aa16.24■□□□□ 0.19
SF1-214ENST00000477596 OR1L4Q8NGR5 311 aa16.24■□□□□ 0.19
SF1-214ENST00000477596 ATP5SQ99766 215 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms