RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 H3BRN7 92 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 CD7P09564 240 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TFPI2P48307 235 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 Q5BKY6 102 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 LINC00305Q7Z4B0 112 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 GBGT1Q8N5D6 347 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ST6GAL2Q96JF0 529 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SELENOKQ9Y6D0 94 aa9.88□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ARPC5O15511 151 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ID1P41134 155 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 NKX2-5P52952 324 aaPredicted RBP9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SNRPD3P62318 126 aaKnown RBP9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 BPIFA4PQ86YQ2 179 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 WFDC3Q8IUB2 231 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 MFFQ9GZY8 342 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
HLA-DPA1-246ENST00000476642 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 RNF222A6NCQ9 220 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 K7EQG2 157 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 IGHV4-30-4P0DP06 118 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ATF4P18848 351 aaPredicted RBP9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ZNF345Q14585 488 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 UHRF2Q96PU4 802 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SLC25A32Q9H2D1 315 aa9.86□□□□□ -0.83
HLA-DPA1-246ENST00000476642 A0A0D9SG52 128 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 G3V3Q6 166 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 JTBO76095 146 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 TMEM37Q8WXS4 190 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 B9D2Q9BPU9 175 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SCRT1Q9BWW7 348 aa9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ISLRO14498 428 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 C1QBP02746 253 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 PSMB3P49720 205 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 ODF3L2Q3SX64 289 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 FFAR4Q5NUL3 377 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 FAM78BQ5VT40 261 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 CCDC28AQ8IWP9 274 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 DEFB125Q8N687 156 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 GNPNAT1Q96EK6 184 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 PSMG3Q9BT73 122 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 RSG1Q9BU20 258 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SRD5A3Q9H8P0 318 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
HLA-DPA1-246ENST00000476642 SMLR1H3BR10 107 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 MBP02144 154 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 FRMD6-AS1P0C7T7 363 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 CXCL2P19875 107 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 RHOBP62745 196 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 EIF5AP63241 154 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 SERF2P84101 59 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 GUK1Q16774 197 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LEMD1Q68G75 181 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KCNRGQ8N5I3 272 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 CLEC5AQ9NY25 188 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 UBQLN2Q9UHD9 624 aa9.83□□□□□ -0.84
HLA-DPA1-246ENST00000476642 A0A087X0K7 114 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KANTRA0A1W2PQU2 76 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 ZNF688P0C7X2 276 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 TAS2R45P59539 299 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 DEFB131AP59861 70 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LCN15Q6UWW0 184 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR2G3Q8NGZ4 309 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 HYLS1Q96M11 299 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 ARPC5LQ9BPX5 153 aa9.82□□□□□ -0.84
HLA-DPA1-246ENST00000476642 A0A1W2PPV4 95 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 C4BPBP20851 252 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 ATP6V0CP27449 155 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 APOC4P55056 127 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 SLC50A1Q9BRV3 221 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 FUT9Q9Y231 359 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 DNAH3Q8TD57 4116 aa9.81□□□□□ -0.84
HLA-DPA1-246ENST00000476642 RPL7L1Q6DKI1 246 aaKnown RBP9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 STHQ8IWL8 128 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR11H4Q8NGC9 324 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 RPRMQ9NS64 109 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KIR2DL5BA0A0G2JN68 375 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KIR2DL5BA0A0G2JPC4 375 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 UBE2CO00762 179 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 SOCS3O14543 225 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms