RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FOXI2Q6ZQN5 318 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 TMEM252Q8N6L7 170 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 MGST2Q99735 147 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 UQCC1Q9NVA1 299 aa17.51■□□□□ 0.39
CPNE1-223ENST00000475146 IGKV3-20P01619 116 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 RPL7P18124 248 aaKnown RBP17.5■□□□□ 0.39
CPNE1-223ENST00000475146 FGL1Q08830 312 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 RAB31Q13636 194 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 PXDC1Q5TGL8 231 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 ARV1Q9H2C2 271 aa17.5■□□□□ 0.39
CPNE1-223ENST00000475146 SAV1Q9H4B6 383 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-223ENST00000475146 LCE6AA0A183 80 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 UBE2L5PA0A1B0GUS4 154 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 DEFB4AO15263 64 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 HBG1P69891 147 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 HBG2P69892 147 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 LRRC37A5PQ49AS3 106 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 C1QTNF4Q9BXJ3 329 aa17.49■□□□□ 0.39
CPNE1-223ENST00000475146 C11orf68Q9H3H3 251 aaKnown RBP17.49■□□□□ 0.39
CPNE1-223ENST00000475146 SSNA1O43805 119 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 RLN2P04090 185 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 S100A11P31949 105 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 CAMLGP49069 296 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 EBLN2Q6P2I7 272 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 PATE2Q6UY27 113 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 C20orf173Q96LM9 149 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 C17orf77Q96MU5 243 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 NMES1Q9C002 83 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 RPRMQ9NS64 109 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 XCL2Q9UBD3 114 aa17.48■□□□□ 0.39
CPNE1-223ENST00000475146 STARD9Q9P2P6 4700 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 F6UB75 175 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 COX7A2P2O60397 106 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 BAXQ07812 192 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 OR4B1Q8NGF8 309 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 RNF24Q9Y225 148 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 WDR83OSQ9Y284 106 aa17.47■□□□□ 0.39
CPNE1-223ENST00000475146 FXYD7P58549 80 aa17.46■□□□□ 0.39
CPNE1-223ENST00000475146 CYCSP99999 105 aaKnown RBP17.46■□□□□ 0.39
CPNE1-223ENST00000475146 VWC2Q2TAL6 325 aa17.46■□□□□ 0.39
CPNE1-223ENST00000475146 SPATA31B1PQ5VZV4 182 aa17.46■□□□□ 0.39
CPNE1-223ENST00000475146 CSNK1G2-AS1Q8NCQ2 148 aa17.46■□□□□ 0.39
CPNE1-223ENST00000475146 NUPR2A6NF83 97 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 JTBO76095 146 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 MIC13Q5XKP0 118 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 IGFL4Q6B9Z1 124 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 LINC00305Q7Z4B0 112 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 Q8NAQ8 132 aa17.45■□□□□ 0.38
CPNE1-223ENST00000475146 IGHV4-28A0A0C4DH34 117 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 ZNF705EA8MWA4 302 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-223ENST00000475146 E5RGE8 158 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 MIFP14174 115 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 ATP6V1FQ16864 119 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 Q6ZRG5 221 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 C11orf45Q8TAV5 145 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 OR5AC2Q9NZP5 309 aa17.44■□□□□ 0.38
CPNE1-223ENST00000475146 ELOA3CA0A087WX78 387 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-223ENST00000475146 TRAV8-2A0A0B4J237 113 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 A0A0J9YX75 114 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 FGF7P21781 194 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 H2BFSP57053 126 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 FAM78BQ5VT40 261 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 C10orf113Q5VZT2 155 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 RNF182Q8N6D2 247 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 LRRC20Q8TCA0 184 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 SLC25A31Q9H0C2 315 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 X6R8D5 127 aa17.43■□□□□ 0.38
CPNE1-223ENST00000475146 A0A087X0K7 114 aa17.42■□□□□ 0.38
CPNE1-223ENST00000475146 NANOS2P60321 138 aaKnown RBP17.42■□□□□ 0.38
CPNE1-223ENST00000475146 CEMP1Q6PRD7 247 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-223ENST00000475146 TMEM37Q8WXS4 190 aa17.42■□□□□ 0.38
CPNE1-223ENST00000475146 CLUHP3Q96NS8 147 aa17.42■□□□□ 0.38
CPNE1-223ENST00000475146 MFFQ9GZY8 342 aa17.42■□□□□ 0.38
CPNE1-223ENST00000475146 TENM2Q9NT68 2774 aa17.42■□□□□ 0.38
CPNE1-223ENST00000475146 H0YIZ8 118 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 RBMY1A1P0DJD3 496 aaKnown RBP17.41■□□□□ 0.38
CPNE1-223ENST00000475146 RBMY1CP0DJD4 496 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PRR20EP86478 221 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PRR20CP86479 221 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PRR20DP86480 221 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PRR20BP86481 221 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PRR20AP86496 221 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PSG9Q00887 426 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 NHLH2Q02577 135 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 RBMY1FQ15415 496 aaKnown RBP17.41■□□□□ 0.38
CPNE1-223ENST00000475146 ZNF738Q8NE65 137 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PHLDA1Q8WV24 401 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-223ENST00000475146 PPP1R1CQ8WVI7 109 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 SLC35B3Q9H1N7 401 aa17.41■□□□□ 0.38
CPNE1-223ENST00000475146 RPL29P47914 159 aaKnown RBP17.4■□□□□ 0.38
CPNE1-223ENST00000475146 B2MP61769 119 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 OPCMLQ14982 345 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 BPIFA4PQ86YQ2 179 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 ZNF709Q8N972 641 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 OR5C1Q8NGR4 320 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 OR1L4Q8NGR5 311 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 DNAJC4Q9NNZ3 241 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 SLC39A9Q9NUM3 307 aa17.4■□□□□ 0.38
CPNE1-223ENST00000475146 KLK5Q9Y337 293 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms