RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 MRPL27Q9P0M9 148 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 UQCR10Q9UDW1 63 aa16.47■□□□□ 0.23
SMIM11A-204ENST00000474455 ZNF324O75467 553 aaPredicted RBP16.46■□□□□ 0.23
SMIM11A-204ENST00000474455 IGLV2-8P01709 118 aa16.46■□□□□ 0.23
SMIM11A-204ENST00000474455 IBA57Q5T440 356 aaKnown RBP16.46■□□□□ 0.23
SMIM11A-204ENST00000474455 FLYWCH2Q96CP2 140 aaKnown RBP16.46■□□□□ 0.23
SMIM11A-204ENST00000474455 HIVEP1P15822 2718 aa16.46■□□□□ 0.23
SMIM11A-204ENST00000474455 NAV3Q8IVL0 2385 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 GGTLC3B5MD39 225 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 OR7C2O60412 319 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 FAM231DQ6ZW35 169 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 PDPNQ86YL7 162 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 OR5B3Q8NH48 314 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 CACNG8Q8WXS5 425 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 HARBI1Q96MB7 349 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 CHRDL1Q9BU40 450 aa16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 RNASE7Q9H1E1 156 aaKnown RBP16.46■□□□□ 0.22
SMIM11A-204ENST00000474455 IGLV2-23P01705 113 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 FRMD6-AS1P0C7T7 363 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 MC5RP33032 325 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 TMEM177Q53S58 311 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 KLHDC1Q8N7A1 406 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 OR4C13Q8NGP0 309 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 HINT2Q9BX68 163 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 BET1LQ9NYM9 111 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 CDC42EP3Q9UKI2 254 aa16.45■□□□□ 0.22
SMIM11A-204ENST00000474455 BMPR1BO00238 502 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 FSHBP01225 129 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 APCSP02743 223 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 SPATA45Q537H7 98 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 SLC25A33Q9BSK2 321 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 FAM103A1Q9BTL3 118 aaKnown RBP16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 ZNF331Q9NQX6 463 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 CD5LO43866 347 aa16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 SAA1P0DJI8 122 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-204ENST00000474455 TEX50A0A1B0GTY4 177 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 INS-IGF2F8WCM5 200 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 MYOD1P15172 320 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 SRIP30626 198 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 RELQ04864 619 aaPredicted RBP16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 CD69Q07108 199 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 HES1Q14469 280 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 TPSG1Q9NRR2 321 aa16.43■□□□□ 0.22
SMIM11A-204ENST00000474455 OOSP1A8MZH6 123 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 CCDC144NLQ6NUI1 221 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 OSR1Q8TAX0 266 aaPredicted RBP16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 YAE1D1Q9NRH1 226 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 ZFP30Q9Y2G7 519 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 FXYD3Q14802 87 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 PMCHL1Q16048 86 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 BORCS7Q96B45 105 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 GRAMD2BQ96HH9 432 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 RNF114Q9Y508 228 aa16.42■□□□□ 0.22
SMIM11A-204ENST00000474455 MTORP42345 2549 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 IGKV1OR2-108A0A075B7D4 117 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 C20orf202A1L168 122 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 SLC25A17O43808 307 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 MGST1P10620 155 aaKnown RBP16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 PMCHP20382 165 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 NIT1Q86X76 327 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 PIFOQ8TCI5 191 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 TSKUQ8WUA8 353 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 MEGF9Q9H1U4 602 aa16.41■□□□□ 0.22
SMIM11A-204ENST00000474455 IGLC2P0DOY2 106 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 IGLC3P0DOY3 106 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 KLF5Q13887 457 aaPredicted RBP16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 DEFB112Q30KQ8 113 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 OR1L4Q8NGR5 311 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 FAM167A-AS1Q96KT0 104 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 SERTAD4Q9NUC0 356 aa16.4■□□□□ 0.22
SMIM11A-204ENST00000474455 PSMB11A5LHX3 300 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 C3orf79P0CE67 100 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 TCL1AP56279 114 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 MRGPRG-AS1Q2M3A8 158 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 KIAA1644Q3SXP7 199 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 MRPL54Q6P161 138 aaKnown RBP16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 RBM14Q96PK6 669 aaKnown RBP16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 RCHY1Q96PM5 261 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 DNAJC4Q9NNZ3 241 aa16.39■□□□□ 0.22
SMIM11A-204ENST00000474455 SPINK4O60575 86 aa16.39■□□□□ 0.21
SMIM11A-204ENST00000474455 MOSP00540 346 aa16.39■□□□□ 0.21
SMIM11A-204ENST00000474455 NPSP0C0P6 89 aa16.39■□□□□ 0.21
SMIM11A-204ENST00000474455 UBE2L3P68036 154 aaKnown RBP16.39■□□□□ 0.21
SMIM11A-204ENST00000474455 SLC25A2Q9BXI2 301 aa16.39■□□□□ 0.21
SMIM11A-204ENST00000474455 LY6G6DO95868 133 aa16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 ERHP84090 104 aaKnown RBP16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 EBI3Q14213 229 aa16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 FAM162BQ5T6X4 162 aa16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 FBXL15Q9H469 300 aa16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 CBY1Q9Y3M2 126 aa16.38■□□□□ 0.21
SMIM11A-204ENST00000474455 A0A1W2PN81 502 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 HNRNPA3P51991 378 aaKnown RBP16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 MMDQ15546 238 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 BATFQ16520 125 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 Q71RC1 249 aaPredicted RBP16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 TMEM219Q86XT9 240 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 OR4A5Q8NH83 315 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 C18orf32Q8TCD1 76 aa16.37■□□□□ 0.21
SMIM11A-204ENST00000474455 SMIM12Q96EX1 92 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms