RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C17orf77Q96MU5 243 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 SHANK2-AS3Q9BTD1 123 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 SCRT1Q9BWW7 348 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 SLC25A39Q9BZJ4 359 aaPredicted RBP8.11□□□□□ -1.11
CKS1B-206ENST00000474215 RPRMQ9NS64 109 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 PTTG2Q9NZH5 202 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 DOK5Q9P104 306 aa8.11□□□□□ -1.11
CKS1B-206ENST00000474215 LSM5Q9Y4Y9 91 aaKnown RBP8.11□□□□□ -1.11
CKS1B-206ENST00000474215 AGRNO00468 2067 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 H3BRN7 92 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 GOSR2O14653 212 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 IGKV3-20P01619 116 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
CKS1B-206ENST00000474215 BCAP31P51572 246 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 SLC38A11Q08AI6 406 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 IL15RAQ13261 267 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 PXDC1Q5TGL8 231 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 ARL6Q9H0F7 186 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 HRH4Q9H3N8 390 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
CKS1B-206ENST00000474215 A0A0J9YX75 114 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 F6UB75 175 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 AGPAT2O15120 278 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 CST7O76096 145 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 RPL7P18124 248 aaKnown RBP8.09□□□□□ -1.11
CKS1B-206ENST00000474215 CAV2P51636 162 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 IFITM3Q01628 133 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 FAM78BQ5VT40 261 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 ZNF546Q86UE3 836 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 ENKURQ8TC29 256 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 LINC00476Q8WZB0 136 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 C20orf173Q96LM9 149 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 UHRF2Q96PU4 802 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 GPN1Q9HCN4 374 aaPredicted RBP8.09□□□□□ -1.11
CKS1B-206ENST00000474215 RNF24Q9Y225 148 aa8.09□□□□□ -1.11
CKS1B-206ENST00000474215 ELOA3CA0A087WX78 387 aaPredicted RBP8.08□□□□□ -1.12
CKS1B-206ENST00000474215 FXYD7P58549 80 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 S100A10P60903 97 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 PSG9Q00887 426 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 FGL1Q08830 312 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 RAB31Q13636 194 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 ZNF705AQ6ZN79 300 aaPredicted RBP8.08□□□□□ -1.12
CKS1B-206ENST00000474215 ZNF709Q8N972 641 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 ARV1Q9H2C2 271 aa8.08□□□□□ -1.12
CKS1B-206ENST00000474215 LYSTQ99698 3801 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 TRAV8-2A0A0B4J237 113 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 ZNF705FA8MVS1 300 aaPredicted RBP8.07□□□□□ -1.12
CKS1B-206ENST00000474215 LY6G6CO95867 125 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 ZNF705DP0CH99 300 aaPredicted RBP8.07□□□□□ -1.12
CKS1B-206ENST00000474215 ZNF705BP0CI00 300 aaPredicted RBP8.07□□□□□ -1.12
CKS1B-206ENST00000474215 HLA-DMBP28068 263 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 S100A11P31949 105 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 SULT1A1P50225 295 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 RAB32Q13637 225 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 NRARPQ7Z6K4 114 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 TMEM252Q8N6L7 170 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 NEU1Q99519 415 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 MGST2Q99735 147 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 BATF3Q9NR55 127 aa8.07□□□□□ -1.12
CKS1B-206ENST00000474215 LYRM2Q9NU23 88 aaPredicted RBP8.07□□□□□ -1.12
CKS1B-206ENST00000474215 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
CKS1B-206ENST00000474215 A0A087X0K7 114 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 IGSF23A1L1A6 192 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 SMIM9A6NGZ8 99 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 A8MTW9 85 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 C11orf94C9JXX5 98 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 INMT-MINDY4F8WBC2 141 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 COX7A2P2O60397 106 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 PRAF2O60831 178 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 CAMLGP49069 296 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 HBG1P69891 147 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 HBG2P69892 147 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 LINC00305Q7Z4B0 112 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 RNF182Q8N6D2 247 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 C2CD4CQ8TF44 421 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 TMEM37Q8WXS4 190 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 DNAJC4Q9NNZ3 241 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 UQCC1Q9NVA1 299 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 WDR83OSQ9Y284 106 aa8.06□□□□□ -1.12
CKS1B-206ENST00000474215 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 IGHV3OR16-12A0A075B7B8 117 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 MRPS12O15235 138 aaKnown RBP8.05□□□□□ -1.12
CKS1B-206ENST00000474215 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
CKS1B-206ENST00000474215 SIX6O95475 246 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 RLN2P04090 185 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 CXCL3P19876 107 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 TCTAP57738 103 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 PRR20EP86478 221 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 PRR20CP86479 221 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 PRR20DP86480 221 aa8.05□□□□□ -1.12
CKS1B-206ENST00000474215 PRR20BP86481 221 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms