RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 XCL2Q9UBD3 114 aa16.35■□□□□ 0.21
PTP4A1-203ENST00000473334 DEDDO75618 318 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 OR5G3P0C626 314 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 RBMY1A1P0DJD3 496 aaKnown RBP16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 RBMY1CP0DJD4 496 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 SLC38A11Q08AI6 406 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 RBMY1FQ15415 496 aaKnown RBP16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 ENKURQ8TC29 256 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 C17orf77Q96MU5 243 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 CLUHP3Q96NS8 147 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
PTP4A1-203ENST00000473334 IGKV3-20P01619 116 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 BCAP31P51572 246 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 EBLN2Q6P2I7 272 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 S100A7AQ86SG5 101 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 ZNF546Q86UE3 836 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 LINC00476Q8WZB0 136 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 ARL6Q9H0F7 186 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 C11orf1Q9H5F2 150 aa16.33■□□□□ 0.2
PTP4A1-203ENST00000473334 PVALBP20472 110 aaPredicted RBP16.32■□□□□ 0.2
PTP4A1-203ENST00000473334 CAV2P51636 162 aa16.32■□□□□ 0.2
PTP4A1-203ENST00000473334 C20orf173Q96LM9 149 aa16.32■□□□□ 0.2
PTP4A1-203ENST00000473334 UHRF2Q96PU4 802 aa16.32■□□□□ 0.2
PTP4A1-203ENST00000473334 HRH4Q9H3N8 390 aa16.32■□□□□ 0.2
PTP4A1-203ENST00000473334 A0A0J9YX75 114 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 GOSR2O14653 212 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 AGPAT2O15120 278 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 RPL7P18124 248 aaKnown RBP16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 S100A10P60903 97 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 PXDC1Q5TGL8 231 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 OR4B1Q8NGF8 309 aa16.31■□□□□ 0.2
PTP4A1-203ENST00000473334 F6UB75 175 aa16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 IFITM3Q01628 133 aa16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 IL15RAQ13261 267 aa16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 RAB32Q13637 225 aa16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 ARV1Q9H2C2 271 aa16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 GPN1Q9HCN4 374 aaPredicted RBP16.3■□□□□ 0.2
PTP4A1-203ENST00000473334 FAM24AA6NFZ4 105 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 CST7O76096 145 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 FXYD7P58549 80 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 FGL1Q08830 312 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 FAM78BQ5VT40 261 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 PATE2Q6UY27 113 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 ZNF709Q8N972 641 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 MGST2Q99735 147 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 RNF24Q9Y225 148 aa16.29■□□□□ 0.2
PTP4A1-203ENST00000473334 ELOA3CA0A087WX78 387 aaPredicted RBP16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 LY6G6CO95867 125 aa16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 PSG9Q00887 426 aa16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 ZNF705AQ6ZN79 300 aaPredicted RBP16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 SLC35B3Q9H1N7 401 aa16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 LYRM2Q9NU23 88 aaPredicted RBP16.28■□□□□ 0.2
PTP4A1-203ENST00000473334 A0A087X0K7 114 aa16.27■□□□□ 0.2
PTP4A1-203ENST00000473334 TRAV8-2A0A0B4J237 113 aa16.27■□□□□ 0.2
PTP4A1-203ENST00000473334 NEU1Q99519 415 aa16.27■□□□□ 0.2
PTP4A1-203ENST00000473334 A8MTW9 85 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 ZNF705FA8MVS1 300 aaPredicted RBP16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 C11orf94C9JXX5 98 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 PRAF2O60831 178 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 ZNF705DP0CH99 300 aaPredicted RBP16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 ZNF705BP0CI00 300 aaPredicted RBP16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 SULT1A1P50225 295 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 RAB31Q13636 194 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 IGFL4Q6B9Z1 124 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 NRARPQ7Z6K4 114 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 UQCC1Q9NVA1 299 aa16.26■□□□□ 0.19
PTP4A1-203ENST00000473334 IGSF23A1L1A6 192 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 COX7A2P2O60397 106 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 CAMLGP49069 296 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 LINC00305Q7Z4B0 112 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 STX12Q86Y82 276 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 RNF182Q8N6D2 247 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 TMEM252Q8N6L7 170 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 C2CD4CQ8TF44 421 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 BATF3Q9NR55 127 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 WDR83OSQ9Y284 106 aa16.25■□□□□ 0.19
PTP4A1-203ENST00000473334 INMT-MINDY4F8WBC2 141 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 MRPS12O15235 138 aaKnown RBP16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 HLA-DMBP28068 263 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 S100A11P31949 105 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 HBG1P69891 147 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 HBG2P69892 147 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 VWC2Q2TAL6 325 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 ZNF738Q8NE65 137 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 CELA1Q9UNI1 258 aa16.24■□□□□ 0.19
PTP4A1-203ENST00000473334 IGHV3OR16-12A0A075B7B8 117 aa16.23■□□□□ 0.19
PTP4A1-203ENST00000473334 SMIM9A6NGZ8 99 aa16.23■□□□□ 0.19
PTP4A1-203ENST00000473334 DUSP14O95147 198 aaKnown RBP16.23■□□□□ 0.19
PTP4A1-203ENST00000473334 TMEM37Q8WXS4 190 aa16.23■□□□□ 0.19
PTP4A1-203ENST00000473334 GOLT1BQ9Y3E0 138 aa16.23■□□□□ 0.19
PTP4A1-203ENST00000473334 UBE2L5PA0A1B0GUS4 154 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 SIX6O95475 246 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 CXCL3P19876 107 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 CNN1P51911 297 aaKnown RBP16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 DEFA1P59665 94 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 DEFA3P59666 94 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 C10orf113Q5VZT2 155 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 AMTNQ6UX39 209 aa16.22■□□□□ 0.19
PTP4A1-203ENST00000473334 Q6ZRG5 221 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms