RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 DEFA3P59666 94 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 PLP1P60201 277 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 FGL1Q08830 312 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 RAB31Q13636 194 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 PXDC1Q5TGL8 231 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 STX12Q86Y82 276 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 PHLDA1Q8WV24 401 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-226ENST00000473066 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 ARL6Q9H0F7 186 aa11.35□□□□□ -0.59
MRPL55-226ENST00000473066 ZNF705EA8MWA4 302 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-226ENST00000473066 PRAF2O60831 178 aa11.34□□□□□ -0.59
MRPL55-226ENST00000473066 DEDDO75618 318 aa11.34□□□□□ -0.59
MRPL55-226ENST00000473066 NANOS2P60321 138 aaKnown RBP11.34□□□□□ -0.59
MRPL55-226ENST00000473066 Q8NAQ8 132 aa11.34□□□□□ -0.59
MRPL55-226ENST00000473066 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
MRPL55-226ENST00000473066 RYR3Q15413 4870 aa11.34□□□□□ -0.59
MRPL55-226ENST00000473066 AGPAT2O15120 278 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 COX7A2P2O60397 106 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 CST7O76096 145 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 DEFB1P60022 68 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 HBG1P69891 147 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 HBG2P69892 147 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 ARL16Q0P5N6 197 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 RAB32Q13637 225 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 LRRC20Q8TCA0 184 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 ARV1Q9H2C2 271 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
MRPL55-226ENST00000473066 FAM24AA6NFZ4 105 aa11.32□□□□□ -0.6
MRPL55-226ENST00000473066 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
MRPL55-226ENST00000473066 LYRM2Q9NU23 88 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-226ENST00000473066 X6R8D5 127 aa11.32□□□□□ -0.6
MRPL55-226ENST00000473066 A0A0J9YX75 114 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 F6UB75 175 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 INMT-MINDY4F8WBC2 141 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 RLN2P04090 185 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 CAMLGP49069 296 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 SULT1A1P50225 295 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 FXYD7P58549 80 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 PSG9Q00887 426 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 BAXQ07812 192 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 CSNK1G2-AS1Q8NCQ2 148 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 LINC00476Q8WZB0 136 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 GOLT1BQ9Y3E0 138 aa11.31□□□□□ -0.6
MRPL55-226ENST00000473066 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
MRPL55-226ENST00000473066 LY6G6CO95867 125 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 S100A11P31949 105 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 C10orf113Q5VZT2 155 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 Q6ZRG5 221 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 NRARPQ7Z6K4 114 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 C20orf173Q96LM9 149 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 MGST2Q99735 147 aa11.3□□□□□ -0.6
MRPL55-226ENST00000473066 ELOA3CA0A087WX78 387 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-226ENST00000473066 A0A087X0K7 114 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 IGSF23A1L1A6 192 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 RBMY1A1P0DJD3 496 aaKnown RBP11.29□□□□□ -0.6
MRPL55-226ENST00000473066 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 CYCSP99999 105 aaKnown RBP11.29□□□□□ -0.6
MRPL55-226ENST00000473066 RBMY1FQ15415 496 aaKnown RBP11.29□□□□□ -0.6
MRPL55-226ENST00000473066 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 OR1L4Q8NGR5 311 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 PFDN5Q99471 154 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 WDR83OSQ9Y284 106 aa11.29□□□□□ -0.6
MRPL55-226ENST00000473066 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 SACSQ9NZJ4 4579 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 RYR2Q92736 4967 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 AMBPP02760 352 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 CXCL2P19875 107 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 IFITM3Q01628 133 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 BPIFA4PQ86YQ2 179 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 SLC25A31Q9H0C2 315 aa11.28□□□□□ -0.6
MRPL55-226ENST00000473066 TMEM189A5PLL7 270 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 SMIM9A6NGZ8 99 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 E5RGE8 158 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 SSNA1O43805 119 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 SIX6O95475 246 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 FGF7P21781 194 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 HLA-DMBP28068 263 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 IL15RAQ13261 267 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 IGFL4Q6B9Z1 124 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
MRPL55-226ENST00000473066 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms