RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 CDK5R1Q15078 307 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 RPEL1Q2QD12 228 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 DEFB121Q5J5C9 76 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 TMEM244Q5VVB8 128 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 ASCL4Q6XD76 172 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 PLEKHG7Q6ZR37 379 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 SLC35E3Q7Z769 313 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 TRAPPC6BQ86SZ2 158 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 GAPTQ8N292 157 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 SYS1Q8N2H4 156 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 ZNF439Q8NDP4 499 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 PXT1Q8NFP0 134 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 OR4D6Q8NGJ1 314 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 HAVCR2Q8TDQ0 301 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 YIPF6Q96EC8 236 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 ADAT3Q96EY9 351 aaPredicted RBP2.05□□□□□ -2.08
HDAC9-221ENST00000471887 OPALINQ96PE5 141 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 CHST6Q9GZX3 395 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 OR2S2Q9NQN1 319 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 IDI2-AS1Q9NZ38 188 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 COL7A1Q02388 2944 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 DNAH7Q8WXX0 4024 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 KIAA1109Q2LD37 5005 aa2.05□□□□□ -2.08
HDAC9-221ENST00000471887 DYNC1H1Q14204 4646 aaKnown RBP2.04□□□□□ -2.08
HDAC9-221ENST00000471887 IGHV6-1A0A0B4J1U7 121 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 A6NIN4 97 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 OR4C45A6NMZ5 311 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 SEC14L6B5MCN3 397 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 LINC01619G3V211 115 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 H0YJX3 145 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 I3L521 148 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 GNGT2O14610 69 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 SULT1B1O43704 296 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 UPK1BO75841 260 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 RPP14O95059 124 aaKnown RBP2.04□□□□□ -2.08
HDAC9-221ENST00000471887 IGKV1D-33P01593 117 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 IGKV1-33P01594 117 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 HLA-DRB1P01911 266 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 OR5AC1P0C628 307 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 GNGT1P63211 74 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 ATP5G2Q06055 141 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 AESQ08117 197 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 DIAPH2-AS1Q14236 149 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 FLOT2Q14254 428 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 MPV17LQ2QL34 196 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 DNAL1Q4LDG9 190 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 LINC00596Q86U02 117 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 LYPD6Q86Y78 171 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 TCTEX1D1Q8N7M0 179 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 YIPF7Q8N8F6 280 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 ZNF565Q8N9K5 539 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 OR2T10Q8NGZ9 312 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 CCDC124Q96CT7 223 aaKnown RBP2.04□□□□□ -2.08
HDAC9-221ENST00000471887 CPNE2Q96FN4 548 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-221ENST00000471887 UBE2E2Q96LR5 201 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 TTTY10Q9BZA0 68 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 FAM107BQ9H098 131 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 AUNIPQ9H7T9 357 aa2.04□□□□□ -2.08
HDAC9-221ENST00000471887 RRP15Q9Y3B9 282 aaKnown RBP2.04□□□□□ -2.08
HDAC9-221ENST00000471887 MEIKINA0A087WXM9 373 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 TMEM30CPA0ZSE6 113 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 TMEM212A6NML5 194 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 M0R129 80 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 DEGS1O15121 323 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 ORC5O43913 435 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 MPDU1O75352 247 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 SC5DO75845 299 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 NDUFA3O95167 84 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 BRI3O95415 125 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 HTR1AP08908 422 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 LGALS1P09382 135 aaKnown RBP2.03□□□□□ -2.08
HDAC9-221ENST00000471887 GZMHP20718 246 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 NFYBP25208 207 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 GNG10P50151 68 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 RBM11P57052 281 aaKnown RBP2.03□□□□□ -2.08
HDAC9-221ENST00000471887 SNRPGP62308 76 aaKnown RBP2.03□□□□□ -2.08
HDAC9-221ENST00000471887 HES1Q14469 280 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 KISS1Q15726 138 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 DEFB136Q30KP8 78 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 FA2HQ7L5A8 372 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 SPATA24Q86W54 205 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR11H1Q8NG94 326 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR51A4Q8NGJ6 313 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR5D18Q8NGL1 313 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR13C9Q8NGT0 318 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR10X1Q8NGY0 326 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 OR10AC1Q8NH08 325 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 TMEM106AQ96A25 262 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 IGF2BP2-AS1Q96M15 143 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 KCTD7Q96MP8 289 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 MYCBPQ99417 103 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-221ENST00000471887 TBX5Q99593 518 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 CIB1Q99828 191 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 HSPB9Q9BQS6 159 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 VSIRQ9H7M9 311 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 SPACA1Q9HBV2 294 aa2.03□□□□□ -2.08
HDAC9-221ENST00000471887 ZC4H2Q9NQZ6 224 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms