RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 Q5VV11 94 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 RASSF6Q6ZTQ3 369 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 SPATA24Q86W54 205 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 C1orf158Q8N1D5 194 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 ZNF676Q8N7Q3 588 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 LRRC20Q8TCA0 184 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 DYNC2LI1Q8TCX1 351 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 RAB2BQ8WUD1 216 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 ASB13Q8WXK3 278 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 LRRC45Q96CN5 670 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 NABP2Q9BQ15 211 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 YIPF3Q9GZM5 350 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 PARVAQ9NVD7 372 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 ZNHIT6Q9NWK9 470 aaKnown RBP-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 OR5AC2Q9NZP5 309 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 APLNQ9ULZ1 77 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 BAIAP2Q9UQB8 552 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 HDGFL3Q9Y3E1 203 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 IQGAP2Q13576 1575 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 MED23Q9ULK4 1368 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 SPTBP11277 2137 aa-0.08□□□□□ -2.42
UBXN4-207ENST00000471246 RGPD2P0DJD1 1756 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 MYO3BQ8WXR4 1341 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 TRBV10-2A0A0K0K1G8 114 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 A0A1B0GW54 56 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 METTL15A6NJ78 407 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 H0YAA0 97 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 NDUFS8O00217 210 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 OR2T1O43869 369 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 ADAP1O75689 374 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 FADS2O95864 444 aaKnown RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 PMP2P02689 132 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 SHBGP04278 402 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 SLC35E2BP0CK96 405 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 PVALBP20472 110 aaPredicted RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 CFL1P23528 166 aaKnown RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 RPS29P62273 56 aaKnown RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 FABP5Q01469 135 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 ZNF345Q14585 488 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 JOSD1Q15040 202 aaPredicted RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 RBM48Q5RL73 367 aaKnown RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 NDUFA11Q86Y39 141 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 TMEM86BQ8N661 226 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 OR4C6Q8NH72 309 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 OR10D3Q8NH80 312 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 STOML3Q8TAV4 291 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 RNASEH2CQ8TDP1 164 aaKnown RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 DNAJB3Q8WWF6 145 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 PPCDCQ96CD2 204 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 SERPINB11Q96P15 392 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 ERMAPQ96PL5 475 aaPredicted RBP-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 AMELYQ99218 206 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 TMEM109Q9BVC6 243 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 MROQ9BYG7 248 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 POFUT2Q9Y2G5 429 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 TIMM22Q9Y584 194 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 KIF20BQ96Q89 1820 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 PTPRDP23468 1912 aa-0.09□□□□□ -2.42
UBXN4-207ENST00000471246 ANK1P16157 1881 aa-0.1□□□□□ -2.42
UBXN4-207ENST00000471246 FOCADQ5VW36 1801 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 KIAA1549LQ6ZVL6 1849 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 CEP162Q5TB80 1403 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 MYH13Q9UKX3 1938 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 TRAV1-1A0A0B4J248 108 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 A0A0D9SG52 128 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 GOLGA8QA0A0J9YX86 632 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 NBDYA0A0U1RRE5 68 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 C20orf202A1L168 122 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 COX7A2LO14548 114 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 LEPROTO15243 131 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 NSA2O95478 260 aaKnown RBP-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 MSMBP08118 114 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 METTL15P1P0C7V9 234 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 LINC00614P0C842 121 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 HIST1H1CP16403 213 aaKnown RBP-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SYT1P21579 422 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 GRPRP30550 384 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 LCN1P31025 176 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 NUP62P37198 522 aaPredicted RBP-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 INSL3P51460 131 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 FXYD2P54710 66 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 HAMPP81172 84 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SMAGPQ0VAQ4 97 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SLAMF1Q13291 335 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 NDUFA5Q16718 116 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 C4orf26Q17RF5 130 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SAPCD1Q5SSQ6 148 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 PDPK2PQ6A1A2 396 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SPINK6Q6UWN8 80 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 C10orf67Q8IYJ2 551 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SIGLECL1Q8N7X8 197 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 Q8N814 137 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 SPERTQ8NA61 448 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 OR52E4Q8NGH9 312 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 GNPNAT1Q96EK6 184 aaPredicted RBP-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 MED10Q9BTT4 135 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 DDA1Q9BW61 102 aa-0.1□□□□□ -2.43
UBXN4-207ENST00000471246 METTL9Q9H1A3 318 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms