RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 CSTL1Q9H114 145 aa10.92□□□□□ -0.66
TMEM39A-205ENST00000468676 SLC25A32Q9H2D1 315 aa10.92□□□□□ -0.66
TMEM39A-205ENST00000468676 COX7A2P2O60397 106 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 FGF7P21781 194 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 PRR20EP86478 221 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 PRR20CP86479 221 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 PRR20DP86480 221 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 PRR20BP86481 221 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 PRR20AP86496 221 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 FGL1Q08830 312 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 FCN2Q15485 313 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 OR1L4Q8NGR5 311 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 THAP6Q8TBB0 222 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 SCRT1Q9BWW7 348 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 ARV1Q9H2C2 271 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 AGRNO00468 2067 aa10.91□□□□□ -0.66
TMEM39A-205ENST00000468676 LYL1P12980 280 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 TMEM41BQ5BJD5 291 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 C10orf113Q5VZT2 155 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 PATE2Q6UY27 113 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 LINC00305Q7Z4B0 112 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 UHRF2Q96PU4 802 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 PFDN5Q99471 154 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 MBD2Q9UBB5 411 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 HSPB11Q9Y547 144 aa10.9□□□□□ -0.66
TMEM39A-205ENST00000468676 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 SOCS3O14543 225 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 SPRY2O43597 315 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 GIPP09681 153 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 SPP1P10451 314 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 B2MP61769 119 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 CLINT1Q14677 625 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 OPCMLQ14982 345 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 ACTL10Q5JWF8 245 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 SPATA31B1PQ5VZV4 182 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 TRPT1Q86TN4 253 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 ZNF709Q8N972 641 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 OVOL2Q9BRP0 275 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 RETNQ9HD89 108 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
TMEM39A-205ENST00000468676 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 TMEM37Q8WXS4 190 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 RNF183Q96D59 192 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 ATP5SQ99766 215 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
TMEM39A-205ENST00000468676 A0A087X0K7 114 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 C17orf112F2Z3M2 114 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 IFNA5P01569 189 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 NUTF2P61970 127 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 DEFB135Q30KP9 77 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 BPIFA4PQ86YQ2 179 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 WDR61Q9GZS3 305 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 RPRMQ9NS64 109 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
TMEM39A-205ENST00000468676 H3BMM0 161 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 CA1P00915 261 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 CXCL2P19875 107 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 SCGB1C1Q8TD33 95 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 CLUHP3Q96NS8 147 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 SAV1Q9H4B6 383 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 HLA-DRB4X5D2U9 266 aa10.86□□□□□ -0.67
TMEM39A-205ENST00000468676 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
TMEM39A-205ENST00000468676 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
TMEM39A-205ENST00000468676 LRRC20Q8TCA0 184 aa10.85□□□□□ -0.67
TMEM39A-205ENST00000468676 C17orf77Q96MU5 243 aa10.85□□□□□ -0.67
TMEM39A-205ENST00000468676 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-205ENST00000468676 MRPS12O15235 138 aaKnown RBP10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 GUK1Q16774 197 aa10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 LCN15Q6UWW0 184 aa10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 IL17DQ8TAD2 202 aa10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 C1QTNF4Q9BXJ3 329 aa10.84□□□□□ -0.67
TMEM39A-205ENST00000468676 INO80EQ8NBZ0 244 aaPredicted RBP10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 AQP10Q96PS8 301 aa10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 SMIM3Q9BZL3 60 aa10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 CLEC5AQ9NY25 188 aa10.83□□□□□ -0.68
TMEM39A-205ENST00000468676 A0A0J9YX75 114 aa10.82□□□□□ -0.68
TMEM39A-205ENST00000468676 MORN5Q5VZ52 161 aa10.82□□□□□ -0.68
TMEM39A-205ENST00000468676 OR2T35Q8NGX2 323 aa10.82□□□□□ -0.68
TMEM39A-205ENST00000468676 C20orf173Q96LM9 149 aa10.82□□□□□ -0.68
TMEM39A-205ENST00000468676 RARRES2Q99969 163 aa10.82□□□□□ -0.68
TMEM39A-205ENST00000468676 TMEM14CQ9P0S9 112 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms